Allele frequency databases for forensic short tandem repeat (STR)
markers. The package provides allele frequency data for 50 markers,
including markers from the Fusion 6C and
SureID kits, among others. These databases are maintained
and used for kinship testing by the Department of Forensic Sciences in
Oslo, Norway.
A minimum allele frequency of 0.001 was applied in all databases. Frequencies below this threshold were adjusted to 0.001.
The following markers are included in the databases:
norSTR::map50
#> Marker Chr cM Kit
#> 1 D1S1656 1 244.23489 Fusion6C/SureID
#> 2 TPOX 2 1.66610 Fusion6C
#> 3 D2S1360 2 35.05805 HDplex
#> 4 D2S441 2 90.47903 Fusion6C/SureID
#> 5 D2S1338 2 223.48320 Fusion6C
#> 6 D3S1358 3 67.17890 Fusion6C
#> 7 D3S3045 3 116.92246 SureID27
#> 8 D3S1744 3 157.24131 HDplex/SureID
#> 9 D4S2366 4 12.94670 HDplex/SureID
#> 10 FGA 4 156.81293 Fusion6C
#> 11 D5S2500 5 70.32067 HDplex
#> 12 D5S2800 5 70.32080 SureID
#> 13 D5S818 5 126.67284 Fusion6C
#> 14 CSF1PO 5 154.43395 Fusion6C
#> 15 D6S477 6 15.77241 SureID27
#> 16 SE33 6 95.44921 Fusion6C
#> 17 D6S474 6 118.66248 HDplex/SureID
#> 18 D7S3048 7 36.14071 SureID
#> 19 D7S820 7 100.20120 Fusion6C
#> 20 D7S1517 7 132.07060 HDplex
#> 21 D8S1132 8 119.96228 HDplex/SureID
#> 22 D8S1179 8 136.44313 Fusion6C
#> 23 D9S1122 9 81.15767 SureID
#> 24 D10S1435 10 3.40182 SureID27
#> 25 D10S2325 10 28.27346 HDplex
#> 26 D10S1248 10 169.89917 Fusion6C/SureID
#> 27 TH01 11 4.48933 Fusion6C
#> 28 D11S2368 11 32.88891 SureID
#> 29 D11S554 11 45.00000 MP3
#> 30 APOAI1 11 117.00000 MP3
#> 31 vWA 12 15.63031 Fusion6C
#> 32 D12S391 12 27.57129 Fusion6C/SureID
#> 33 D13S325 13 44.90825 SureID
#> 34 D13S317 13 79.83074 Fusion6C
#> 35 D14S1434 14 20.49462 SureID
#> 36 D15S659 15 49.51748 SureID
#> 37 Penta E 15 124.05054 Fusion6C
#> 38 D16S539 16 50.00000 Fusion6C/SureID
#> 39 D17S906 17 14.70000 MP6
#> 40 D17S1301 17 113.11145 SureID
#> 41 D18S51 18 88.92051 Fusion6C
#> 42 D18S1364 18 91.21746 SureID
#> 43 D19S253 19 39.27234 SureID
#> 44 D19S433 19 51.72618 Fusion6C
#> 45 D20S482 20 13.25549 SureID
#> 46 D21S11 21 14.64555 Fusion6C
#> 47 D21S2055 21 49.46478 HDplex/SureID
#> 48 Penta D 21 59.37591 Fusion6C
#> 49 D22GATA198B05 22 7.39585 SureID
#> 50 D22S1045 22 46.21362 Fusion6C/SureID# install.packages("pak")
pak::pkg_install("magnusdv/norSTR")