Unreleased
ApplyPolygenicScore 3.0.1
Added
- Added hemizygous allele handling to dosage calculation
- Added toggle to hexbinplot at sample size threshold in
create.pgs.with.continuous.phenotype.plot
Changed
- Updated INDEL effect switch reporting by strand flip checker
- Updated data structuring for automated statistical analysis in
apply.polygenic.score
ApplyPolygenicScore 3.0.0
(2024-12-02)
Added
- Added handling of overlapping deletion allele notation
- Added secondary PGS/VCF variant matching method using rsID after
first attempt with genomic coordinates
- Added checks for rsID as an optional column in input PGS weight
files
- Added functionality to assess allele matches and correct strand
flips
ApplyPolygenicScore 2.0.0
(2024-07-31)
Changed
- Renamed functions starting with reserved vocabulary for S3 generic
methods merge. -> combine.
ApplyPolygenicScore 1.0.0
(2024-07-25)
ApplyPolygenicScore 0.1.0
(2024-07-25)