Last updated on 2025-03-09 07:53:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.2.0 | 23.88 | 249.83 | 273.71 | OK | |
| r-devel-linux-x86_64-debian-gcc | 3.2.0 | 16.56 | 174.74 | 191.30 | OK | |
| r-devel-linux-x86_64-fedora-clang | 3.2.0 | 487.70 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 3.2.0 | 499.18 | ERROR | |||
| r-devel-macos-arm64 | 3.2.0 | 116.00 | OK | |||
| r-devel-macos-x86_64 | 3.2.0 | 381.00 | OK | |||
| r-devel-windows-x86_64 | 3.2.0 | 31.00 | 299.00 | 330.00 | OK | |
| r-patched-linux-x86_64 | 3.2.0 | 31.89 | 247.29 | 279.18 | OK | |
| r-release-linux-x86_64 | 3.2.0 | 26.59 | 244.51 | 271.10 | OK | |
| r-release-macos-arm64 | 3.2.0 | 137.00 | OK | |||
| r-release-macos-x86_64 | 3.2.0 | 354.00 | OK | |||
| r-release-windows-x86_64 | 3.2.0 | 32.00 | 295.00 | 327.00 | OK | |
| r-oldrel-macos-arm64 | 3.2.0 | 82.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 3.2.0 | 276.00 | OK | |||
| r-oldrel-windows-x86_64 | 3.2.0 | 40.00 | 362.00 | 402.00 | OK |
Version: 3.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [50s/155s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(spant)
spant 3.2.0
Attaching package: 'spant'
The following object is masked from 'package:stats':
sd
>
> test_check("spant")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_fitting.R:57:3'): Test ABfit coarse-fitting steps only ───────
`fit_res` has changed from known value recorded in 'abfit_res_coarse.rds'.
Component "res_tab": Component "res.niter": Mean relative difference: 0.6688525
Backtrace:
▆
1. └─testthat::expect_equal_to_reference(...) at test_fitting.R:57:3
2. └─testthat::expect_known_value(..., update = update)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 3.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [59s/203s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(spant)
spant 3.2.0
Attaching package: 'spant'
The following object is masked from 'package:stats':
sd
>
> test_check("spant")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_fitting.R:57:3'): Test ABfit coarse-fitting steps only ───────
`fit_res` has changed from known value recorded in 'abfit_res_coarse.rds'.
Component "res_tab": Component "res.niter": Mean relative difference: 0.6688525
Backtrace:
▆
1. └─testthat::expect_equal_to_reference(...) at test_fitting.R:57:3
2. └─testthat::expect_known_value(..., update = update)
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 16 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 3.2.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘abfit-baseline-opts.Rmd’ using rmarkdown
Quitting from lines 11-19 [unnamed-chunk-1] (abfit-baseline-opts.Rmd)
Error: processing vignette 'abfit-baseline-opts.Rmd' failed with diagnostics:
package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'systemfonts'
--- failed re-building ‘abfit-baseline-opts.Rmd’
--- re-building ‘spant-basis-simulation.Rmd’ using rmarkdown
Quitting from lines 11-19 [unnamed-chunk-1] (spant-basis-simulation.Rmd)
Error: processing vignette 'spant-basis-simulation.Rmd' failed with diagnostics:
package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'systemfonts'
--- failed re-building ‘spant-basis-simulation.Rmd’
--- re-building ‘spant-intro.Rmd’ using rmarkdown
Quitting from lines 11-19 [unnamed-chunk-1] (spant-intro.Rmd)
Error: processing vignette 'spant-intro.Rmd' failed with diagnostics:
package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'systemfonts'
--- failed re-building ‘spant-intro.Rmd’
--- re-building ‘spant-metabolite-simulation.Rmd’ using rmarkdown
Quitting from lines 11-19 [unnamed-chunk-1] (spant-metabolite-simulation.Rmd)
Error: processing vignette 'spant-metabolite-simulation.Rmd' failed with diagnostics:
package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'systemfonts'
--- failed re-building ‘spant-metabolite-simulation.Rmd’
--- re-building ‘spant-preprocessing.Rmd’ using rmarkdown
Quitting from lines 11-19 [unnamed-chunk-1] (spant-preprocessing.Rmd)
Error: processing vignette 'spant-preprocessing.Rmd' failed with diagnostics:
package or namespace load failed for 'ragg' in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called 'systemfonts'
--- failed re-building ‘spant-preprocessing.Rmd’
SUMMARY: processing the following files failed:
‘abfit-baseline-opts.Rmd’ ‘spant-basis-simulation.Rmd’
‘spant-intro.Rmd’ ‘spant-metabolite-simulation.Rmd’
‘spant-preprocessing.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-arm64