CRAN Package Check Results for Package pfr

Last updated on 2024-12-25 07:50:26 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 1.67 30.99 32.66 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.1 1.45 36.88 38.33 OK
r-devel-linux-x86_64-fedora-clang 1.0.1 79.77 OK
r-devel-linux-x86_64-fedora-gcc 1.0.1 103.14 OK
r-devel-windows-x86_64 1.0.1 3.00 66.00 69.00 ERROR
r-patched-linux-x86_64 1.0.1 1.73 44.61 46.34 OK
r-release-linux-x86_64 1.0.1 1.65 45.51 47.16 OK
r-release-macos-arm64 1.0.1 29.00 OK
r-release-macos-x86_64 1.0.1 51.00 OK
r-release-windows-x86_64 1.0.1 3.00 64.00 67.00 OK
r-oldrel-macos-arm64 1.0.1 47.00 OK
r-oldrel-macos-x86_64 1.0.1 103.00 OK
r-oldrel-windows-x86_64 1.0.1 3.00 74.00 77.00 OK

Check Details

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘my-vignette.Rmd’ using rmarkdown make cmd is make -f '/home/hornik/tmp/R.check/r-devel-clang/Work/build/etc/Makeconf' -f '/home/hornik/tmp/R.check/r-devel-clang/Work/build/share/make/shlib.mk' -f '/home/hornik/.R/Makevars-clang' SHLIB_LDFLAGS='$(SHLIB_CXXLDFLAGS)' SHLIB_LD='$(SHLIB_CXXLD)' SHLIB='filecb5993378ae60.so' CXX_DEFS=-DR_NO_REMAP OBJECTS='filecb5993378ae60.o' make would use make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpG7eIln' clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pfr/include/" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include/" -I"/home/hornik/tmp/scratch/Rtmpm1RvuM/RLIBS_c834177577b5f/RcppEigen/include/" -I"/home/hornik/tmp/scratch/Rtmpm1RvuM/RLIBS_c834177577b5f/BH/include/" -DEIGEN_NO_DEBUG -DDROPPINGTHISINRPACKAGE -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c filecb5993378ae60.cpp -o filecb5993378ae60.o if test "zfilecb5993378ae60.o" != "z"; then \ echo clang++-19 -std=gnu++17 -shared -L"/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib" -Wl,-O1 -o filecb5993378ae60.so filecb5993378ae60.o -L"/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib" -lR; \ clang++-19 -std=gnu++17 -shared -L"/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib" -Wl,-O1 -o filecb5993378ae60.so filecb5993378ae60.o -L"/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib" -lR; \ fi make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpG7eIln' Quitting from lines 181-182 [unnamed-chunk-7] (my-vignette.Rmd) Error: processing vignette 'my-vignette.Rmd' failed with diagnostics: esamp_fast1<100, 3, double>'; did you mean 'Rf_pf::rvsamp::MVNSampler'? 62 | rvsamp::MVNSampler<dimstate_MEAN_FACTOR_MSVOL_APF,double> m_transitionSampler; | ^~~~~~~~~~~~~~~~~~ | Rf_pf::rvsamp::MVNSampler /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pfr/include/pf/rv_samp.h:695:7: note: 'Rf_pf::rvsamp::MVNSampler' declared here 695 | class MVNSampler : public rvsamp_base | ^ filecb5993378ae60.cpp:148:10: error: use of undeclared identifier 'rveval' 148 | return rveval::evalMultivNorm<dimstate_MEAN_FACTOR_MSVOL_APF, double>(x1, | ^ filecb5993378ae60.cpp:176:12: error: use of undeclared identifier 'rveval' 176 | return rveval::evalMultivNorm<dimstate_MEAN_FACTOR_MSVOL_APF,double>(x1, | ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] 5 warnings and 20 errors generated. make[1]: *** [/home/hornik/tmp/R.check/r-devel-clang/Work/build/etc/Makeconf:202: filecb5993378ae60.o] Error 1 --- failed re-building ‘my-vignette.Rmd’ SUMMARY: processing the following file failed: ‘my-vignette.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.1
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'my-vignette.Rmd' using rmarkdown make cmd is make -f "D:/RCompile/recent/R/etc/x64/Makeconf" -f "D:/RCompile/recent/R/share/make/winshlib.mk" SHLIB_LDFLAGS='$(SHLIB_CXXLDFLAGS)' SHLIB_LD='$(SHLIB_CXXLD)' SHLIB="filebb0810ae364d.dll" WIN=64 TCLBIN= CXX_DEFS=-DR_NO_REMAP OBJECTS="filebb0810ae364d.o" make would use make[1]: Entering directory '/d/temp/2024_12_22_01_50_00_26287/RtmpKkGtdf' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I"D:/RCompile/CRANpkg/lib/4.5/pfr/include/" -I"D:/RCompile/CRANpkg/lib/4.5/Rcpp/include/" -I"D:/temp/2024_12_22_01_50_00_26287/RtmpsjUnBP/RLIBS_9ae041c14cb1/RcppEigen/include/" -I"D:/temp/2024_12_22_01_50_00_26287/RtmpsjUnBP/RLIBS_9ae041c14cb1/BH/include/" -DEIGEN_NO_DEBUG -DDROPPINGTHISINRPACKAGE -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -DR_NO_REMAP -c filebb0810ae364d.cpp -o filebb0810ae364d.o if test "zfilebb0810ae364d.o" != "z"; then \ if test -e "filebb0810ae364d-win.def"; then \ echo g++ -std=gnu++17 -shared -s -static-libgcc -o filebb0810ae364d.dll filebb0810ae364d-win.def filebb0810ae364d.o -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -std=gnu++17 -shared -s -static-libgcc -o filebb0810ae364d.dll filebb0810ae364d-win.def filebb0810ae364d.o -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ else \ echo EXPORTS > tmp.def; \ nm filebb0810ae364d.o | sed -n 's/^.* [BCDRT] / /p' | sed -e '/[.]refptr[.]/d' -e '/[.]weak[.]/d' | sed 's/[^ ][^ ]*/"&"/g' >> tmp.def; \ echo g++ -std=gnu++17 -shared -s -static-libgcc -o filebb0810ae364d.dll tmp.def filebb0810ae364d.o -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ g++ -std=gnu++17 -shared -s -static-libgcc -o filebb0810ae364d.dll tmp.def filebb0810ae364d.o -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64" -L"d:/rtools44/x86_64-w64-mingw32.static.posix/lib" -L"D:/RCompile/recent/R/bin/x64" -lR ; \ rm -f tmp.def; \ fi \ fi make[1]: Leaving directory '/d/temp/2024_12_22_01_50_00_26287/RtmpKkGtdf' Quitting from lines 181-182 [unnamed-chunk-7] (my-vignette.Rmd) Error: processing vignette 'my-vignette.Rmd' failed with diagnostics: rix<double, 3, 3>, 1>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<double, double>, const Eigen::Matrix<double, 3, 1>, const Eigen::Matrix<double, 3, 1> > >; typename Eigen::NumTraits<typename Eigen::internal::traits<T>::Scalar>::Real = double; typename Eigen::internal::traits<T>::Scalar = double]' D:/RCompile/CRANpkg/lib/4.5/pfr/include/pf/rv_eval.h:1061:59: required from 'float_t rveval::evalMultivNorm(const Eigen::Matrix<float_t, dim, 1>&, const Eigen::Matrix<float_t, dim, 1>&, const Eigen::Matrix<float_t, dim, dim>&, bool) [with long long unsigned int dim = 3; float_t = double]' filebb0810ae364d.cpp:148:72: required from here D:/temp/2024_12_22_01_50_00_26287/RtmpsjUnBP/RLIBS_9ae041c14cb1/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits<double>::type' {aka '__m128d'} [-Wignored-attributes] make[1]: *** [D:/RCompile/recent/R/etc/x64/Makeconf:297: filebb0810ae364d.o] Error 1 --- failed re-building 'my-vignette.Rmd' SUMMARY: processing the following file failed: 'my-vignette.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64