CRAN Package Check Results for Package ngme2

Last updated on 2026-08-01 07:51:47 CEST.

Flavor	Version	Tinstall	Tcheck	Ttotal	Status	Flags
r-devel-linux-x86_64-debian-clang	0.9.8	478.03	325.04	803.07	OK
r-devel-linux-x86_64-debian-gcc	0.9.8	381.74	257.66	639.40	NOTE
r-devel-linux-x86_64-fedora-clang	0.9.8	567.00	5658.24	6225.24	ERROR
r-devel-linux-x86_64-fedora-gcc	0.9.8	438.00	5554.06	5992.06	ERROR
r-devel-windows-x86_64	0.9.8	603.00	365.00	968.00	OK
r-patched-linux-x86_64	0.9.8	507.62	348.85	856.47	OK
r-release-linux-x86_64	0.9.8	509.75	408.00	917.75	OK
r-release-macos-arm64	0.9.8	97.00	24.00	121.00	OK
r-release-macos-x86_64	0.9.8	301.00	286.00	587.00	OK
r-release-windows-x86_64	0.9.8	595.00	376.00	971.00	OK
r-oldrel-macos-arm64	0.9.8	87.00	30.00	117.00	OK
r-oldrel-macos-x86_64	0.9.8	295.00	211.00	506.00	OK
r-oldrel-windows-x86_64	0.9.8	732.00	506.00	1238.00	OK

Check Details

Version: 0.9.8
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp01I6EX’ ‘~/tmp/scratch/Rtmp0TpV6I’ ‘~/tmp/scratch/Rtmp0xtIOD’ ‘~/tmp/scratch/Rtmp1DSkf8’ ‘~/tmp/scratch/Rtmp1KVyG2’ ‘~/tmp/scratch/Rtmp1gc3Ac’ ‘~/tmp/scratch/Rtmp2dbIn7’ ‘~/tmp/scratch/Rtmp3ViHHJ’ ‘~/tmp/scratch/Rtmp46nrCJ’ ‘~/tmp/scratch/Rtmp4KD65k’ ‘~/tmp/scratch/Rtmp5321MI’ ‘~/tmp/scratch/Rtmp5fwAPF’ ‘~/tmp/scratch/Rtmp5habo7’ ‘~/tmp/scratch/Rtmp5iHZHk’ ‘~/tmp/scratch/Rtmp72SEge’ ‘~/tmp/scratch/Rtmp7U1qGe’ ‘~/tmp/scratch/Rtmp80CWdM’ ‘~/tmp/scratch/Rtmp8Jim7c’ ‘~/tmp/scratch/Rtmp8nm246’ ‘~/tmp/scratch/Rtmp9Zr30S’ ‘~/tmp/scratch/RtmpAuauAJ’ ‘~/tmp/scratch/RtmpBMAHtq’ ‘~/tmp/scratch/RtmpBMfwqv’ ‘~/tmp/scratch/RtmpBWaxLo’ ‘~/tmp/scratch/RtmpCD6cZQ’ ‘~/tmp/scratch/RtmpCSMvsR’ ‘~/tmp/scratch/RtmpCaVFqi’ ‘~/tmp/scratch/RtmpD2d7tK’ ‘~/tmp/scratch/RtmpD5uXZH’ ‘~/tmp/scratch/RtmpDBszFm’ ‘~/tmp/scratch/RtmpDPyho6’ ‘~/tmp/scratch/RtmpEW7F2J’ ‘~/tmp/scratch/RtmpEvDHXq’ ‘~/tmp/scratch/RtmpF7oWsi’ ‘~/tmp/scratch/RtmpFt6j9K’ ‘~/tmp/scratch/RtmpG0qJF3’ ‘~/tmp/scratch/RtmpGW6wyl’ ‘~/tmp/scratch/RtmpGv4Ohv’ ‘~/tmp/scratch/RtmpGwtfSn’ ‘~/tmp/scratch/RtmpH8s06y’ ‘~/tmp/scratch/RtmpHXOkW4’ ‘~/tmp/scratch/RtmpHf1LB6’ ‘~/tmp/scratch/RtmpHjRxtW’ ‘~/tmp/scratch/RtmpHrSEWP’ ‘~/tmp/scratch/RtmpHsxkTq’ ‘~/tmp/scratch/RtmpHyhy6s’ ‘~/tmp/scratch/RtmpIs053E’ ‘~/tmp/scratch/RtmpJKA8Ep’ ‘~/tmp/scratch/RtmpJRbxwv’ ‘~/tmp/scratch/RtmpJW7jsE’ ‘~/tmp/scratch/RtmpJgpjMe’ ‘~/tmp/scratch/RtmpK2VpDI’ ‘~/tmp/scratch/RtmpKFd7Hk’ ‘~/tmp/scratch/RtmpKIMwhp’ ‘~/tmp/scratch/RtmpKLg2FK’ ‘~/tmp/scratch/RtmpKMbhzC’ ‘~/tmp/scratch/RtmpKYEQC2’ ‘~/tmp/scratch/RtmpKn9dDd’ ‘~/tmp/scratch/RtmpKxrk1d’ ‘~/tmp/scratch/RtmpLXWg8g’ ‘~/tmp/scratch/RtmpLgLuCV’ ‘~/tmp/scratch/RtmpMircgc’ ‘~/tmp/scratch/RtmpNCBDkQ’ ‘~/tmp/scratch/RtmpNIl9G2’ ‘~/tmp/scratch/RtmpNef0jO’ ‘~/tmp/scratch/RtmpNfiU94’ ‘~/tmp/scratch/RtmpOeTlcS’ ‘~/tmp/scratch/RtmpPEjcVR’ ‘~/tmp/scratch/RtmpPNAWLK’ ‘~/tmp/scratch/RtmpQ9dBtK’ ‘~/tmp/scratch/RtmpQAp3u8’ ‘~/tmp/scratch/RtmpQcYARW’ ‘~/tmp/scratch/RtmpQtozb6’ ‘~/tmp/scratch/RtmpR7uF7K’ ‘~/tmp/scratch/RtmpRQTyVj’ ‘~/tmp/scratch/RtmpRTXvfC’ ‘~/tmp/scratch/RtmpRoYMaG’ ‘~/tmp/scratch/RtmpRtkqdS’ ‘~/tmp/scratch/RtmpSUpHwG’ ‘~/tmp/scratch/RtmpShnWy8’ ‘~/tmp/scratch/RtmpSpy8vy’ ‘~/tmp/scratch/RtmpT1CdJZ’ ‘~/tmp/scratch/RtmpU8vWXO’ ‘~/tmp/scratch/RtmpUGfFM6’ ‘~/tmp/scratch/RtmpUkbm0a’ ‘~/tmp/scratch/RtmpVG5TKZ’ ‘~/tmp/scratch/RtmpVKTJDk’ ‘~/tmp/scratch/RtmpVvDwes’ ‘~/tmp/scratch/RtmpW7mhvO’ ‘~/tmp/scratch/RtmpWKJbnB’ ‘~/tmp/scratch/RtmpWbbIU7’ ‘~/tmp/scratch/RtmpWhbFdF’ ‘~/tmp/scratch/RtmpWnfM0z’ ‘~/tmp/scratch/RtmpYJYlO1’ ‘~/tmp/scratch/RtmpYW3tJJ’ ‘~/tmp/scratch/RtmpYceg8D’ ‘~/tmp/scratch/RtmpYlP1c9’ ‘~/tmp/scratch/RtmpYmK1hb’ ‘~/tmp/scratch/RtmpYuQfKo’ ‘~/tmp/scratch/RtmpZ9EY2M’ ‘~/tmp/scratch/RtmpZc4KVV’ ‘~/tmp/scratch/RtmpZcI0k4’ ‘~/tmp/scratch/RtmpZrhAZO’ ‘~/tmp/scratch/Rtmpa4emH5’ ‘~/tmp/scratch/Rtmpb3YfIb’ ‘~/tmp/scratch/Rtmpbnfpiy’ ‘~/tmp/scratch/RtmpcGWx7n’ ‘~/tmp/scratch/RtmpcVzNSK’ ‘~/tmp/scratch/Rtmpcwjzg6’ ‘~/tmp/scratch/Rtmpd49WQp’ ‘~/tmp/scratch/RtmpdV6dn7’ ‘~/tmp/scratch/Rtmpe2oV3f’ ‘~/tmp/scratch/Rtmpee27RV’ ‘~/tmp/scratch/RtmpehAUpo’ ‘~/tmp/scratch/Rtmpf5ldbP’ ‘~/tmp/scratch/Rtmpf8Fruv’ ‘~/tmp/scratch/Rtmpf9YKHI’ ‘~/tmp/scratch/RtmpfOcCJ5’ ‘~/tmp/scratch/RtmpgSFUEq’ ‘~/tmp/scratch/Rtmph6USe0’ ‘~/tmp/scratch/RtmphLWctz’ ‘~/tmp/scratch/RtmphLonKD’ ‘~/tmp/scratch/RtmphmCCfy’ ‘~/tmp/scratch/Rtmpi80vzI’ ‘~/tmp/scratch/RtmpiD3QkQ’ ‘~/tmp/scratch/RtmpjLPYR1’ ‘~/tmp/scratch/RtmpjgJpP8’ ‘~/tmp/scratch/Rtmpk3xqEa’ ‘~/tmp/scratch/Rtmpk6u8Kq’ ‘~/tmp/scratch/RtmpkJw99p’ ‘~/tmp/scratch/RtmpkMTAPm’ ‘~/tmp/scratch/Rtmpkcml8z’ ‘~/tmp/scratch/RtmplPXg4c’ ‘~/tmp/scratch/RtmplSy58h’ ‘~/tmp/scratch/RtmplmxkUn’ ‘~/tmp/scratch/Rtmpme7Tj3’ ‘~/tmp/scratch/RtmpmkRoYO’ ‘~/tmp/scratch/RtmpmperT9’ ‘~/tmp/scratch/RtmpnFAJLQ’ ‘~/tmp/scratch/RtmpnIyttH’ ‘~/tmp/scratch/RtmpnZrkYz’ ‘~/tmp/scratch/RtmpoLdwaY’ ‘~/tmp/scratch/RtmpoblcfU’ ‘~/tmp/scratch/RtmppYcYH5’ ‘~/tmp/scratch/Rtmppx7Knd’ ‘~/tmp/scratch/RtmpqHQU7f’ ‘~/tmp/scratch/RtmpqjmBkA’ ‘~/tmp/scratch/Rtmpqr7sEE’ ‘~/tmp/scratch/RtmprTHggh’ ‘~/tmp/scratch/RtmprfMSp8’ ‘~/tmp/scratch/RtmprmVfIW’ ‘~/tmp/scratch/Rtmps72cKe’ ‘~/tmp/scratch/RtmpsQDqxP’ ‘~/tmp/scratch/RtmpsVwDOX’ ‘~/tmp/scratch/RtmpszpZjA’ ‘~/tmp/scratch/Rtmpu34HOa’ ‘~/tmp/scratch/Rtmpu7wT8V’ ‘~/tmp/scratch/RtmpuFOLop’ ‘~/tmp/scratch/RtmpuG3Cco’ ‘~/tmp/scratch/RtmpuKRRlb’ ‘~/tmp/scratch/RtmpuSJ8vJ’ ‘~/tmp/scratch/RtmpufrPay’ ‘~/tmp/scratch/RtmpuxhpoP’ ‘~/tmp/scratch/Rtmpv65Xwf’ ‘~/tmp/scratch/Rtmpw9P4op’ ‘~/tmp/scratch/RtmpwjhR5T’ ‘~/tmp/scratch/Rtmpx3WR1h’ ‘~/tmp/scratch/RtmpxGQFAG’ ‘~/tmp/scratch/RtmpxhHITN’ ‘~/tmp/scratch/RtmpxocRaE’ ‘~/tmp/scratch/Rtmpyj39cN’ ‘~/tmp/scratch/RtmpypdRC6’ ‘~/tmp/scratch/RtmpzL38wj’ ‘~/tmp/scratch/xvfb-run.0oa8kw’ ‘~/tmp/scratch/xvfb-run.131tm8’ ‘~/tmp/scratch/xvfb-run.1eRoEH’ ‘~/tmp/scratch/xvfb-run.28Ubwe’ ‘~/tmp/scratch/xvfb-run.5BvY1q’ ‘~/tmp/scratch/xvfb-run.5SRq8k’ ‘~/tmp/scratch/xvfb-run.5oR05o’ ‘~/tmp/scratch/xvfb-run.5yPXRU’ ‘~/tmp/scratch/xvfb-run.5zJwYH’ ‘~/tmp/scratch/xvfb-run.6357Go’ ‘~/tmp/scratch/xvfb-run.6geu0D’ ‘~/tmp/scratch/xvfb-run.6gyvj6’ ‘~/tmp/scratch/xvfb-run.79RHNU’ ‘~/tmp/scratch/xvfb-run.7gi2nD’ ‘~/tmp/scratch/xvfb-run.8Cm0uy’ ‘~/tmp/scratch/xvfb-run.8Urj5O’ ‘~/tmp/scratch/xvfb-run.9oqDDA’ ‘~/tmp/scratch/xvfb-run.Af4l8o’ ‘~/tmp/scratch/xvfb-run.BjC39G’ ‘~/tmp/scratch/xvfb-run.C1lDOs’ ‘~/tmp/scratch/xvfb-run.DY9blw’ ‘~/tmp/scratch/xvfb-run.E4PVbu’ ‘~/tmp/scratch/xvfb-run.E5VeOX’ ‘~/tmp/scratch/xvfb-run.EDTdeA’ ‘~/tmp/scratch/xvfb-run.GML9i9’ ‘~/tmp/scratch/xvfb-run.GOf9eX’ ‘~/tmp/scratch/xvfb-run.GS75c2’ ‘~/tmp/scratch/xvfb-run.HuJfPh’ ‘~/tmp/scratch/xvfb-run.IJI1qJ’ ‘~/tmp/scratch/xvfb-run.IQF4x0’ ‘~/tmp/scratch/xvfb-run.JjCXJV’ ‘~/tmp/scratch/xvfb-run.KVGn5K’ ‘~/tmp/scratch/xvfb-run.MllPj9’ ‘~/tmp/scratch/xvfb-run.NTifAd’ ‘~/tmp/scratch/xvfb-run.NlElCc’ ‘~/tmp/scratch/xvfb-run.O6d1HA’ ‘~/tmp/scratch/xvfb-run.PgICQ6’ ‘~/tmp/scratch/xvfb-run.Pt0bl3’ ‘~/tmp/scratch/xvfb-run.QHla3o’ ‘~/tmp/scratch/xvfb-run.R15p5H’ ‘~/tmp/scratch/xvfb-run.Smnicx’ ‘~/tmp/scratch/xvfb-run.TiUjhu’ ‘~/tmp/scratch/xvfb-run.V3c5Gc’ ‘~/tmp/scratch/xvfb-run.VCaRn1’ ‘~/tmp/scratch/xvfb-run.VXT7PT’ ‘~/tmp/scratch/xvfb-run.WQMyUN’ ‘~/tmp/scratch/xvfb-run.ZwjX8c’ ‘~/tmp/scratch/xvfb-run.aXa1PV’ ‘~/tmp/scratch/xvfb-run.aoNdPP’ ‘~/tmp/scratch/xvfb-run.ascCz5’ ‘~/tmp/scratch/xvfb-run.b90dSR’ ‘~/tmp/scratch/xvfb-run.cQAfbW’ ‘~/tmp/scratch/xvfb-run.cX8E2Z’ ‘~/tmp/scratch/xvfb-run.fTc6WF’ ‘~/tmp/scratch/xvfb-run.gOacpU’ ‘~/tmp/scratch/xvfb-run.huTVCN’ ‘~/tmp/scratch/xvfb-run.isXzmH’ ‘~/tmp/scratch/xvfb-run.jCQvpz’ ‘~/tmp/scratch/xvfb-run.jZOLPY’ ‘~/tmp/scratch/xvfb-run.o2fanp’ ‘~/tmp/scratch/xvfb-run.oi7mZg’ ‘~/tmp/scratch/xvfb-run.ozhMU4’ ‘~/tmp/scratch/xvfb-run.pFR87B’ ‘~/tmp/scratch/xvfb-run.qdtX38’ ‘~/tmp/scratch/xvfb-run.r8THKK’ ‘~/tmp/scratch/xvfb-run.rRB9oH’ ‘~/tmp/scratch/xvfb-run.sTPsp7’ ‘~/tmp/scratch/xvfb-run.uFu9v2’ ‘~/tmp/scratch/xvfb-run.uQVnfZ’ ‘~/tmp/scratch/xvfb-run.w9m6H1’ ‘~/tmp/scratch/xvfb-run.x8oud8’ ‘~/tmp/scratch/xvfb-run.xULk4U’ ‘~/tmp/scratch/xvfb-run.xirfho’ ‘~/tmp/scratch/xvfb-run.y3p6Lt’ ‘~/tmp/scratch/xvfb-run.z4QXCT’ ‘~/tmp/scratch/xvfb-run.z58eHI’ ‘~/tmp/scratch/xvfb-run.zDOd8l’ ‘~/tmp/scratch/xvfb-run.zveUaE’ ‘/dev/shm/sm_segment.gimli1.1001.3e230000.0’ ‘/dev/shm/sm_segment.gimli1.1001.51bf0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.56e60000.0’ ‘/dev/shm/sm_segment.gimli1.1001.6c710000.0’ ‘/dev/shm/sm_segment.gimli1.1001.99e00000.0’ ‘/dev/shm/sm_segment.gimli1.1001.9efb0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.de0e0000.0’ ‘/dev/shm/sm_segment.gimli1.1001.e6640000.0’ ‘/dev/shm/sm_segment.gimli1.1001.f1fa0000.0’ ‘~/.cache/pocl/uncached/tempfile_31YUI5’ ‘~/.cache/pocl/uncached/tempfile_N4M0va’ ‘~/.cache/pocl/uncached/tempfile_RHb5N9’ ‘~/.cache/pocl/uncached/tempfile_SDHoQi’ ‘~/.cache/pocl/uncached/tempfile_TnN3jE’ ‘~/.cache/pocl/uncached/tempfile_YALUlu’ ‘~/.cache/pocl/uncached/tempfile_e6MKRk’ ‘~/.cache/pocl/uncached/tempfile_h7inXj’ ‘~/.cache/pocl/uncached/tempfile_tybkm7’ ‘~/.cache/pocl/uncached/tempfile_xpPm8O’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.9.8
Check: tests
Result: ERROR Running ‘testthat.R’ [90m/49m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > > test_check("ngme2") Loading required package: ngme2 This is ngme2 of version 0.9.8 - See our homepage: https://davidbolin.github.io/ngme2 for more details. Attaching package: 'ngme2' The following object is masked from 'package:stats': ar List of 6 $ mean : num [1:3] -1.768 0.745 -2.22 $ sd : num [1:3] 0.613 0.706 0.752 $ 0.05q : num [1:3] -2.8 -0.38 -3.44 $ 0.95q : num [1:3] -0.798 1.981 -1.053 $ median: num [1:3] -1.758 0.728 -2.21 $ mode : num [1:3] -1.9 0.7 -2.3 - attr(*, "samples")= num [1:10, 1:500] -1.039 -1.266 -2.591 -0.913 3.392 ... Starting estimation... iteration = : 1 grad.norm() = 505.319 pflug_sum = 0, max_pflug_sum = 0 --------------------------- iteration = : 2 grad.norm() = 480.836 pflug_sum = 242274, max_pflug_sum = 242274 --------------------------- iteration = : 3 grad.norm() = 461.834 pflug_sum = 463837, max_pflug_sum = 463837 --------------------------- iteration = : 4 grad.norm() = 437.541 pflug_sum = 665438, max_pflug_sum = 665438 --------------------------- iteration = : 5 grad.norm() = 423.162 pflug_sum = 850281, max_pflug_sum = 850281 --------------------------- iteration = : 6 grad.norm() = 392.011 pflug_sum = 1.01562e+06, max_pflug_sum = 1.01562e+06 --------------------------- iteration = : 7 grad.norm() = 345.923 pflug_sum = 1.15061e+06, max_pflug_sum = 1.15061e+06 --------------------------- iteration = : 8 grad.norm() = 326.852 pflug_sum = 1.26312e+06, max_pflug_sum = 1.26312e+06 --------------------------- iteration = : 9 grad.norm() = 288.587 pflug_sum = 1.35696e+06, max_pflug_sum = 1.35696e+06 --------------------------- iteration = : 10 grad.norm() = 251.089 pflug_sum = 1.42891e+06, max_pflug_sum = 1.42891e+06 --------------------------- Starting posterior sampling... Posterior sampling done. Average standard deviation of the posterior W: 0.313424450712541 Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters. OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead. OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set). Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.9.8
Check: tests
Result: ERROR Running ‘testthat.R’ [91m/49m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > > test_check("ngme2") Loading required package: ngme2 This is ngme2 of version 0.9.8 - See our homepage: https://davidbolin.github.io/ngme2 for more details. Attaching package: 'ngme2' The following object is masked from 'package:stats': ar List of 6 $ mean : num [1:3] -2 0.887 -1.798 $ sd : num [1:3] 0.829 0.912 0.976 $ 0.05q : num [1:3] -3.355 -0.581 -3.415 $ 0.95q : num [1:3] -0.734 2.314 -0.119 $ median: num [1:3] -1.984 0.888 -1.785 $ mode : num [1:3] -1.9 1.3 -1.7 - attr(*, "samples")= num [1:10, 1:500] -3.22 -3.51 -2.47 -1.14 2.05 ... Starting estimation... iteration = : 1 grad.norm() = 518.507 pflug_sum = 0, max_pflug_sum = 0 --------------------------- iteration = : 2 grad.norm() = 497.538 pflug_sum = 257724, max_pflug_sum = 257724 --------------------------- iteration = : 3 grad.norm() = 478.134 pflug_sum = 494991, max_pflug_sum = 494991 --------------------------- iteration = : 4 grad.norm() = 460.648 pflug_sum = 714903, max_pflug_sum = 714903 --------------------------- iteration = : 5 grad.norm() = 433.228 pflug_sum = 914207, max_pflug_sum = 914207 --------------------------- iteration = : 6 grad.norm() = 413.885 pflug_sum = 1.09323e+06, max_pflug_sum = 1.09323e+06 --------------------------- iteration = : 7 grad.norm() = 384.327 pflug_sum = 1.2514e+06, max_pflug_sum = 1.2514e+06 --------------------------- iteration = : 8 grad.norm() = 353.573 pflug_sum = 1.3847e+06, max_pflug_sum = 1.3847e+06 --------------------------- iteration = : 9 grad.norm() = 321.276 pflug_sum = 1.49645e+06, max_pflug_sum = 1.49645e+06 --------------------------- iteration = : 10 grad.norm() = 285.554 pflug_sum = 1.58754e+06, max_pflug_sum = 1.58754e+06 --------------------------- Starting posterior sampling... Posterior sampling done. Average standard deviation of the posterior W: 0.274808031564465 Use ngme_post_samples() to access posterior samples and ngme_result() to access latent model parameters. Flavor: r-devel-linux-x86_64-fedora-gcc