CRAN Package Check Results for Package insight

Last updated on 2025-02-17 07:50:36 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 29.68 519.83 549.51 OK
r-devel-linux-x86_64-debian-gcc 1.0.2 17.98 334.05 352.03 OK
r-devel-linux-x86_64-fedora-clang 1.0.2 1071.50 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.2 917.39 ERROR
r-devel-macos-arm64 1.0.2 158.00 OK
r-devel-macos-x86_64 1.0.2 482.00 OK
r-devel-windows-x86_64 1.0.2 29.00 383.00 412.00 OK
r-patched-linux-x86_64 1.0.2 31.06 500.99 532.05 OK
r-release-linux-x86_64 1.0.2 24.55 516.44 540.99 OK
r-release-macos-arm64 1.0.2 150.00 OK
r-release-macos-x86_64 1.0.2 613.00 OK
r-release-windows-x86_64 1.0.2 30.00 386.00 416.00 OK
r-oldrel-macos-arm64 1.0.1 182.00 OK
r-oldrel-macos-x86_64 1.0.2 335.00 OK
r-oldrel-windows-x86_64 1.0.2 32.00 485.00 517.00 OK

Check Details

Version: 1.0.2
Check: tests
Result: ERROR Running ‘testthat.R’ [11m/16m] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(insight) > test_check("insight") Starting 2 test processes [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ] ══ Skipped tests (72) ══════════════════════════════════════════════════════════ • On CRAN (64): 'test-GLMMadaptive.R:1:1', 'test-averaging.R:3:1', 'test-brms.R:1:1', 'test-brms_aterms.R:1:1', 'test-brms_gr_random_effects.R:1:1', 'test-brms_missing.R:1:1', 'test-brms_von_mises.R:1:1', 'test-blmer.R:249:3', 'test-clean_names.R:103:3', 'test-clean_parameters.R:2:3', 'test-clean_parameters.R:35:3', 'test-clmm.R:165:3', 'test-cpglmm.R:145:3', 'test-export_table.R:4:3', 'test-export_table.R:8:3', 'test-export_table.R:106:3', 'test-export_table.R:133:3', 'test-export_table.R:164:3', 'test-export_table.R:193:3', 'test-export_table.R:205:3', 'test-export_table.R:233:3', 'test-find_smooth.R:31:3', 'test-find_random.R:27:3', 'test-format_table.R:1:1', 'test-format_table_ci.R:71:3', 'test-gam.R:1:1', 'test-get_data.R:385:1', 'test-get_loglikelihood.R:93:3', 'test-get_loglikelihood.R:158:3', 'test-get_predicted.R:2:1', 'test-get_priors.R:3:3', 'test-get_varcov.R:40:3', 'test-is_converged.R:28:1', 'test-lme.R:34:3', 'test-lme.R:210:3', 'test-glmmTMB.R:71:3', 'test-glmmTMB.R:755:3', 'test-glmmTMB.R:787:3', 'test-marginaleffects.R:1:1', 'test-mgcv.R:1:1', 'test-mipo.R:1:1', 'test-mvrstanarm.R:1:1', 'test-panelr-asym.R:142:3', 'test-panelr.R:272:3', 'test-phylolm.R:5:1', 'test-r2_nakagawa_bernoulli.R:1:1', 'test-r2_nakagawa_beta.R:1:1', 'test-r2_nakagawa_binomial.R:1:1', 'test-r2_nakagawa_gamma.R:1:1', 'test-r2_nakagawa_linear.R:1:1', 'test-r2_nakagawa_negbin.R:1:1', 'test-r2_nakagawa_negbin_zi.R:1:1', 'test-r2_nakagawa_ordered_beta.R:1:1', 'test-r2_nakagawa_poisson.R:1:1', 'test-r2_nakagawa_poisson_zi.R:1:1', 'test-r2_nakagawa_truncated_poisson.R:1:1', 'test-r2_nakagawa_tweedie.R:1:1', 'test-rlmer.R:259:3', 'test-rqss.R:1:1', 'test-rstanarm.R:1:1', 'test-spatial.R:1:1', 'test-svylme.R:1:1', 'test-vgam.R:1:1', 'test-weightit.R:1:1' • On Linux (3): 'test-BayesFactorBF.R:1:1', 'test-MCMCglmm.R:1:1', 'test-get_data.R:150:3' • Package `logistf` is loaded and breaks `mmrm::mmrm()` (1): 'test-mmrm.R:4:1' • TRUE is TRUE (1): 'test-fixest.R:2:1' • works interactively (2): 'test-coxph-panel.R:34:3', 'test-coxph.R:38:3' • {bigglm} is not installed (1): 'test-model_info.R:24:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-get_loglikelihood.R:216:3'): get_loglikelihood - gamm4 ─────── as.numeric(ll) (`actual`) not equal to -101.1107 (`expected`). `actual`: -99.1 `expected`: -101.1 ── Failure ('test-get_variance.R:49:3'): get_variance-1 ──────────────────────── v1$var.intercept (`actual`) not equal to c(Subject = 612.10016) (`expected`). `actual`: 593.3 `expected`: 612.1 ── Failure ('test-get_variance.R:53:3'): get_variance-1 ──────────────────────── v1$var.slope (`actual`) not equal to c(Subject.Days = 35.07171) (`expected`). `actual`: 593.3 `expected`: 35.1 ── Failure ('test-get_variance.R:60:3'): get_variance-2 ──────────────────────── v2$var.intercept (`actual`) not equal to c(Subject = 627.56905) (`expected`). `actual`: 593.3 `expected`: 627.6 ── Failure ('test-get_variance.R:64:3'): get_variance-2 ──────────────────────── v2$var.slope (`actual`) not equal to c(Subject.Days = 35.85838) (`expected`). `actual`: 593.3 `expected`: 35.9 ── Failure ('test-get_variance.R:71:3'): get_variance-3 ──────────────────────── v3$var.intercept (`actual`) not equal to c(subgrp.grp.1 = 0, Subject = 662.52047, grp.1 = 0) (`expected`). `actual` is NULL `expected` is a double vector (0, 662.52047, 0) ── Failure ('test-get_variance.R:79:3'): get_variance-3 ──────────────────────── v3$var.slope (`actual`) not equal to c(Subject.Days = 34.25771, subgrp.grp.Days = 7.88485, grp.Days = 0) (`expected`). `actual` is NULL `expected` is a double vector (34.25771, 7.88485, 0) ── Failure ('test-get_variance.R:91:3'): get_variance-4 ──────────────────────── v4$var.intercept (`actual`) not equal to c(Subject = 1378.17851) (`expected`). `actual`: 811.1 `expected`: 1378.2 ── Failure ('test-get_variance.R:99:3'): get_variance-5 ──────────────────────── v5$var.intercept (`actual`) not equal to c(`subgrp:grp` = 38.76069, Subject = 1377.50569, grp = 3.32031) (`expected`). `actual`: 654.2 654.2 654.2 `expected`: 38.8 1377.5 3.3 ── Failure ('test-get_variance.R:112:3'): get_variance-6 ─────────────────────── v6$var.intercept (`actual`) not equal to c(plate = 0.71691) (`expected`). `actual`: 0.13 `expected`: 0.72 ── Failure ('test-get_variance.R:113:3'): get_variance-6 ─────────────────────── v6$var.random (`actual`) not equal to 0.71691 (`expected`). `actual`: 0.13 `expected`: 0.72 ── Failure ('test-get_variance.R:124:3'): get_variance-7 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 593.3 `expected$var.random`: 627.6 `actual$var.residual`: 593.3 `expected$var.residual`: 653.6 `actual$var.distribution`: 593.3 `expected$var.distribution`: 653.6 `actual$var.intercept`: 593.3 `expected$var.intercept`: 627.6 `actual$var.slope`: 593.3 `expected$var.slope`: 35.9 ── Failure ('test-get_variance.R:144:3'): get_variance-8 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 21856.9 `expected$var.random`: 1502.2 `actual$var.residual`: 766.9 `expected$var.residual`: 842.0 `actual$var.distribution`: 766.9 `expected$var.distribution`: 842.0 `actual$var.slope`: 766.9 `expected$var.slope`: 52.7 ── Failure ('test-get_variance.R:169:3'): get_variance-9 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 1264.6 `expected$var.random`: 1711.4 `actual$var.residual`: 790.4 `expected$var.residual`: 748.8 `actual$var.distribution`: 790.4 `expected$var.distribution`: 748.8 `actual$var.intercept`: 790.4 `expected$var.intercept`: 663.3 `actual$var.slope`: 790.4 790.4 `expected$var.slope`: 882.4 1415.7 actual$cor.slope_intercept vs expected$cor.slope_intercept [,1] - actual$cor.slope_intercept[1, ] 0.0000000 + expected$cor.slope_intercept[1, ] 0.3611731 - actual$cor.slope_intercept[2, ] 0.0000000 + expected$cor.slope_intercept[2, ] 0.3318785 `actual$cor.slopes`: 0.00 `expected$cor.slopes`: 0.85 ── Failure ('test-get_variance.R:198:3'): get_variance-10 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual` is length 8 `expected` is length 7 names(actual) | names(expected) [1] "var.fixed" | "var.fixed" [1] [2] "var.random" - [3] "var.residual" | "var.residual" [2] [4] "var.distribution" | "var.distribution" [3] [5] "var.dispersion" | "var.dispersion" [4] `actual$var.random` is a double vector (739.145250002286) `expected$var.random` is absent names(actual$var.slope) | names(expected$var.slope) [1] "Subject.1.Days2(3,6]" - [2] "Subject.1.Days2(6,10]" - [3] "Subject.Days2(-1,3]" | "Subject.Days2(-1,3]" [1] [4] "Subject.Days2(3,6]" | "Subject.Days2(3,6]" [2] [5] "Subject.Days2(6,10]" | "Subject.Days2(6,10]" [3] actual$var.slope | expected$var.slope [1] 739.145250002286 - 0 [1] [2] 739.145250002286 - 994.015865559888 [2] [3] 739.145250002286 - 1545.72576115283 [3] [4] 739.145250002286 - [5] 739.145250002286 - names(actual$cor.slopes) | names(expected$cor.slopes) [1] "Subject.1.Days2(-1,3]-Days2(3,6]" - [2] "Subject.1.Days2(-1,3]-Days2(6,10]" - [3] "Subject.1.Days2(3,6]-Days2(6,10]" | "Subject.1.Days2(3,6]-Days2(6,10]" [1] `actual$cor.slopes`: 0 0 0 `expected$cor.slopes`: 0.859480774219098 ── Failure ('test-get_variance.R:222:3'): get_variance-11 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 589.0 `expected$var.random`: 1446.1 `actual$var.residual`: 981.6 `expected$var.residual`: 748.8 `actual$var.distribution`: 981.6 `expected$var.distribution`: 748.8 `actual$var.slope`: 981.6 981.6 981.6 `expected$var.slope`: 663.3 2098.2 2722.2 `actual$cor.slopes`: 0.00 0.00 0.00 `expected$cor.slopes`: 0.80 0.73 0.92 ── Failure ('test-get_variance.R:250:3'): get_variance-12 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 589.0 `expected$var.random`: 1446.1 `actual$var.residual`: 981.6 `expected$var.residual`: 748.8 `actual$var.distribution`: 981.6 `expected$var.distribution`: 748.8 `actual$var.slope`: 981.6 981.6 981.6 `expected$var.slope`: 663.3 2098.2 2722.2 `actual$cor.slopes`: 0.00 0.00 0.00 `expected$cor.slopes`: 0.80 0.73 0.92 ── Failure ('test-get_variance.R:283:3'): get_variance-cat_random_slope ──────── vc$cor.slopes (`actual`) not equal to c(...) (`expected`). `actual`: 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 `expected`: 1.0 1.0 1.0 1.0 1.0 1.0 -1.0 -1.0 -1.0 -1.0 ── Failure ('test-get_variance.R:326:3'): random effects CIs, simple slope ───── `vc` (`actual`) not equal to list(...) (`expected`). `actual[[1]]`: 935.7 `expected[[1]]`: 921.9 `actual[[2]]`: 17808.7 `expected[[2]]`: 1068.0 `actual[[3]]`: 624.9 `expected[[3]]`: 764.5 `actual[[4]]`: 624.9 `expected[[4]]`: 764.5 `actual[[6]]`: 624.9 624.9 `expected[[6]]`: 37.5 27.6 `actual[[7]]`: 0.00 `expected[[7]]`: 0.46 ── Failure ('test-get_variance.R:353:3'): random effects CIs, poly slope ─────── vc$cor.slopes (`actual`) not equal to c(`replicate.poly(temp, 2)1-poly(temp, 2)2` = 0.940016422944175) (`expected`). `actual`: 0.00 `expected`: 0.94 ── Failure ('test-is_converged.R:23:3'): is_converged ────────────────────────── is_converged(model) is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-lmer.R:60:3'): get_df ──────────────────────────────────────── get_df(m1, type = "satterthwaite") (`actual`) not equal to c(`(Intercept)` = 16.99973, Days = 16.99998) (`expected`). `actual`: 18.1 115.7 `expected`: 17.0 17.0 ── Failure ('test-lmer.R:334:3'): get_variance ───────────────────────────────── get_variance(m1) (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 17503.7 `expected$var.random`: 1698.1 `actual$var.slope`: 593.3 `expected$var.slope`: 35.1 ── Failure ('test-lmer.R:353:3'): get_variance ───────────────────────────────── get_variance_random(m1) (`actual`) not equal to c(var.random = 1698.084) (`expected`). `actual`: 17503.7 `expected`: 1698.1 ── Failure ('test-lmer.R:377:3'): get_variance ───────────────────────────────── get_variance_slope(m1) (`actual`) not equal to c(var.slope.Subject.Days = 35.07171) (`expected`). `actual`: 593.3 `expected`: 35.1 ── Failure ('test-lmer.R:388:3'): get_variance ───────────────────────────────── suppressWarnings(get_variance(m2)) (`actual`) not equal to list(...) (`expected`). `actual` is length 6 `expected` is length 5 names(actual) | names(expected) [1] "var.fixed" | "var.fixed" [1] [2] "var.random" - [3] "var.residual" | "var.residual" [2] [4] "var.distribution" | "var.distribution" [3] [5] "var.dispersion" | "var.dispersion" [4] `actual$var.random` is a double vector (2058.53584626217) `expected$var.random` is absent `actual$var.residual`: 686.2 `expected$var.residual`: 941.8 `actual$var.distribution`: 686.2 `expected$var.distribution`: 941.8 `actual$var.intercept`: 686.2 686.2 686.2 `expected$var.intercept`: 0.0 1357.4 24.4 ── Failure ('test-lmer.R:558:3'): get_predicted_ci: warning when model matrix and varcovmat do not match ── head(data.frame(p)$Predicted) (`actual`) not equal to known$Predicted (`expected`). `actual`: 37.586 47.556 56.800 65.318 73.111 80.177 `expected`: 37.534 47.957 58.789 70.029 81.677 93.735 [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.2
Check: tests
Result: ERROR Running ‘testthat.R’ [569s/379s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(insight) > test_check("insight") Starting 2 test processes Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session. Superclass process has cloneable=FALSE, but subclass r_session has cloneable=TRUE. A subclass cannot be cloneable when its superclass is not cloneable, so cloning will be disabled for r_session. [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ] ══ Skipped tests (72) ══════════════════════════════════════════════════════════ • On CRAN (64): 'test-GLMMadaptive.R:1:1', 'test-averaging.R:3:1', 'test-brms.R:1:1', 'test-brms_aterms.R:1:1', 'test-brms_gr_random_effects.R:1:1', 'test-brms_missing.R:1:1', 'test-brms_von_mises.R:1:1', 'test-blmer.R:249:3', 'test-clean_names.R:103:3', 'test-clean_parameters.R:2:3', 'test-clean_parameters.R:35:3', 'test-clmm.R:165:3', 'test-cpglmm.R:145:3', 'test-export_table.R:4:3', 'test-export_table.R:8:3', 'test-export_table.R:106:3', 'test-export_table.R:133:3', 'test-export_table.R:164:3', 'test-export_table.R:193:3', 'test-export_table.R:205:3', 'test-export_table.R:233:3', 'test-find_smooth.R:31:3', 'test-format_table.R:1:1', 'test-format_table_ci.R:71:3', 'test-find_random.R:27:3', 'test-gam.R:1:1', 'test-get_data.R:385:1', 'test-get_loglikelihood.R:93:3', 'test-get_loglikelihood.R:158:3', 'test-get_predicted.R:2:1', 'test-get_priors.R:3:3', 'test-get_varcov.R:40:3', 'test-is_converged.R:28:1', 'test-lme.R:34:3', 'test-lme.R:210:3', 'test-glmmTMB.R:71:3', 'test-glmmTMB.R:755:3', 'test-glmmTMB.R:787:3', 'test-marginaleffects.R:1:1', 'test-mgcv.R:1:1', 'test-mipo.R:1:1', 'test-mvrstanarm.R:1:1', 'test-panelr-asym.R:142:3', 'test-panelr.R:272:3', 'test-phylolm.R:5:1', 'test-r2_nakagawa_bernoulli.R:1:1', 'test-r2_nakagawa_beta.R:1:1', 'test-r2_nakagawa_binomial.R:1:1', 'test-r2_nakagawa_gamma.R:1:1', 'test-r2_nakagawa_linear.R:1:1', 'test-r2_nakagawa_negbin.R:1:1', 'test-r2_nakagawa_negbin_zi.R:1:1', 'test-r2_nakagawa_ordered_beta.R:1:1', 'test-r2_nakagawa_poisson.R:1:1', 'test-r2_nakagawa_poisson_zi.R:1:1', 'test-r2_nakagawa_truncated_poisson.R:1:1', 'test-r2_nakagawa_tweedie.R:1:1', 'test-rlmer.R:259:3', 'test-rqss.R:1:1', 'test-rstanarm.R:1:1', 'test-spatial.R:1:1', 'test-svylme.R:1:1', 'test-vgam.R:1:1', 'test-weightit.R:1:1' • On Linux (3): 'test-BayesFactorBF.R:1:1', 'test-MCMCglmm.R:1:1', 'test-get_data.R:150:3' • Package `logistf` is loaded and breaks `mmrm::mmrm()` (1): 'test-mmrm.R:4:1' • TRUE is TRUE (1): 'test-fixest.R:2:1' • works interactively (2): 'test-coxph-panel.R:34:3', 'test-coxph.R:38:3' • {bigglm} is not installed (1): 'test-model_info.R:24:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-get_loglikelihood.R:216:3'): get_loglikelihood - gamm4 ─────── as.numeric(ll) (`actual`) not equal to -101.1107 (`expected`). `actual`: -99.1 `expected`: -101.1 ── Failure ('test-get_variance.R:49:3'): get_variance-1 ──────────────────────── v1$var.intercept (`actual`) not equal to c(Subject = 612.10016) (`expected`). `actual`: 593.3 `expected`: 612.1 ── Failure ('test-get_variance.R:53:3'): get_variance-1 ──────────────────────── v1$var.slope (`actual`) not equal to c(Subject.Days = 35.07171) (`expected`). `actual`: 593.3 `expected`: 35.1 ── Failure ('test-get_variance.R:60:3'): get_variance-2 ──────────────────────── v2$var.intercept (`actual`) not equal to c(Subject = 627.56905) (`expected`). `actual`: 593.3 `expected`: 627.6 ── Failure ('test-get_variance.R:64:3'): get_variance-2 ──────────────────────── v2$var.slope (`actual`) not equal to c(Subject.Days = 35.85838) (`expected`). `actual`: 593.3 `expected`: 35.9 ── Failure ('test-get_variance.R:71:3'): get_variance-3 ──────────────────────── v3$var.intercept (`actual`) not equal to c(subgrp.grp.1 = 0, Subject = 662.52047, grp.1 = 0) (`expected`). `actual` is NULL `expected` is a double vector (0, 662.52047, 0) ── Failure ('test-get_variance.R:79:3'): get_variance-3 ──────────────────────── v3$var.slope (`actual`) not equal to c(Subject.Days = 34.25771, subgrp.grp.Days = 7.88485, grp.Days = 0) (`expected`). `actual` is NULL `expected` is a double vector (34.25771, 7.88485, 0) ── Failure ('test-get_variance.R:91:3'): get_variance-4 ──────────────────────── v4$var.intercept (`actual`) not equal to c(Subject = 1378.17851) (`expected`). `actual`: 811.1 `expected`: 1378.2 ── Failure ('test-get_variance.R:99:3'): get_variance-5 ──────────────────────── v5$var.intercept (`actual`) not equal to c(`subgrp:grp` = 38.76069, Subject = 1377.50569, grp = 3.32031) (`expected`). `actual`: 654.2 654.2 654.2 `expected`: 38.8 1377.5 3.3 ── Failure ('test-get_variance.R:112:3'): get_variance-6 ─────────────────────── v6$var.intercept (`actual`) not equal to c(plate = 0.71691) (`expected`). `actual`: 0.13 `expected`: 0.72 ── Failure ('test-get_variance.R:113:3'): get_variance-6 ─────────────────────── v6$var.random (`actual`) not equal to 0.71691 (`expected`). `actual`: 0.13 `expected`: 0.72 ── Failure ('test-get_variance.R:124:3'): get_variance-7 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 593.3 `expected$var.random`: 627.6 `actual$var.residual`: 593.3 `expected$var.residual`: 653.6 `actual$var.distribution`: 593.3 `expected$var.distribution`: 653.6 `actual$var.intercept`: 593.3 `expected$var.intercept`: 627.6 `actual$var.slope`: 593.3 `expected$var.slope`: 35.9 ── Failure ('test-get_variance.R:144:3'): get_variance-8 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 21856.9 `expected$var.random`: 1502.2 `actual$var.residual`: 766.9 `expected$var.residual`: 842.0 `actual$var.distribution`: 766.9 `expected$var.distribution`: 842.0 `actual$var.slope`: 766.9 `expected$var.slope`: 52.7 ── Failure ('test-get_variance.R:169:3'): get_variance-9 ─────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 1264.6 `expected$var.random`: 1711.4 `actual$var.residual`: 790.4 `expected$var.residual`: 748.8 `actual$var.distribution`: 790.4 `expected$var.distribution`: 748.8 `actual$var.intercept`: 790.4 `expected$var.intercept`: 663.3 `actual$var.slope`: 790.4 790.4 `expected$var.slope`: 882.4 1415.7 actual$cor.slope_intercept vs expected$cor.slope_intercept [,1] - actual$cor.slope_intercept[1, ] 0.0000000 + expected$cor.slope_intercept[1, ] 0.3611731 - actual$cor.slope_intercept[2, ] 0.0000000 + expected$cor.slope_intercept[2, ] 0.3318785 `actual$cor.slopes`: 0.00 `expected$cor.slopes`: 0.85 ── Failure ('test-get_variance.R:198:3'): get_variance-10 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual` is length 8 `expected` is length 7 names(actual) | names(expected) [1] "var.fixed" | "var.fixed" [1] [2] "var.random" - [3] "var.residual" | "var.residual" [2] [4] "var.distribution" | "var.distribution" [3] [5] "var.dispersion" | "var.dispersion" [4] `actual$var.random` is a double vector (739.145250002286) `expected$var.random` is absent names(actual$var.slope) | names(expected$var.slope) [1] "Subject.1.Days2(3,6]" - [2] "Subject.1.Days2(6,10]" - [3] "Subject.Days2(-1,3]" | "Subject.Days2(-1,3]" [1] [4] "Subject.Days2(3,6]" | "Subject.Days2(3,6]" [2] [5] "Subject.Days2(6,10]" | "Subject.Days2(6,10]" [3] actual$var.slope | expected$var.slope [1] 739.145250002286 - 0 [1] [2] 739.145250002286 - 994.015865559888 [2] [3] 739.145250002286 - 1545.72576115283 [3] [4] 739.145250002286 - [5] 739.145250002286 - names(actual$cor.slopes) | names(expected$cor.slopes) [1] "Subject.1.Days2(-1,3]-Days2(3,6]" - [2] "Subject.1.Days2(-1,3]-Days2(6,10]" - [3] "Subject.1.Days2(3,6]-Days2(6,10]" | "Subject.1.Days2(3,6]-Days2(6,10]" [1] `actual$cor.slopes`: 0 0 0 `expected$cor.slopes`: 0.859480774219098 ── Failure ('test-get_variance.R:222:3'): get_variance-11 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 589.0 `expected$var.random`: 1446.1 `actual$var.residual`: 981.6 `expected$var.residual`: 748.8 `actual$var.distribution`: 981.6 `expected$var.distribution`: 748.8 `actual$var.slope`: 981.6 981.6 981.6 `expected$var.slope`: 663.3 2098.2 2722.2 `actual$cor.slopes`: 0.00 0.00 0.00 `expected$cor.slopes`: 0.80 0.73 0.92 ── Failure ('test-get_variance.R:250:3'): get_variance-12 ────────────────────── `vmodel` (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 589.0 `expected$var.random`: 1446.1 `actual$var.residual`: 981.6 `expected$var.residual`: 748.8 `actual$var.distribution`: 981.6 `expected$var.distribution`: 748.8 `actual$var.slope`: 981.6 981.6 981.6 `expected$var.slope`: 663.3 2098.2 2722.2 `actual$cor.slopes`: 0.00 0.00 0.00 `expected$cor.slopes`: 0.80 0.73 0.92 ── Failure ('test-get_variance.R:283:3'): get_variance-cat_random_slope ──────── vc$cor.slopes (`actual`) not equal to c(...) (`expected`). `actual`: 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 `expected`: 1.0 1.0 1.0 1.0 1.0 1.0 -1.0 -1.0 -1.0 -1.0 ── Failure ('test-get_variance.R:326:3'): random effects CIs, simple slope ───── `vc` (`actual`) not equal to list(...) (`expected`). `actual[[1]]`: 935.7 `expected[[1]]`: 921.9 `actual[[2]]`: 17808.7 `expected[[2]]`: 1068.0 `actual[[3]]`: 624.9 `expected[[3]]`: 764.5 `actual[[4]]`: 624.9 `expected[[4]]`: 764.5 `actual[[6]]`: 624.9 624.9 `expected[[6]]`: 37.5 27.6 `actual[[7]]`: 0.00 `expected[[7]]`: 0.46 ── Failure ('test-get_variance.R:353:3'): random effects CIs, poly slope ─────── vc$cor.slopes (`actual`) not equal to c(`replicate.poly(temp, 2)1-poly(temp, 2)2` = 0.940016422944175) (`expected`). `actual`: 0.00 `expected`: 0.94 ── Failure ('test-is_converged.R:23:3'): is_converged ────────────────────────── is_converged(model) is not TRUE `actual`: FALSE `expected`: TRUE ── Failure ('test-lmer.R:60:3'): get_df ──────────────────────────────────────── get_df(m1, type = "satterthwaite") (`actual`) not equal to c(`(Intercept)` = 16.99973, Days = 16.99998) (`expected`). `actual`: 18.1 115.7 `expected`: 17.0 17.0 ── Failure ('test-lmer.R:334:3'): get_variance ───────────────────────────────── get_variance(m1) (`actual`) not equal to list(...) (`expected`). `actual$var.random`: 17503.7 `expected$var.random`: 1698.1 `actual$var.slope`: 593.3 `expected$var.slope`: 35.1 ── Failure ('test-lmer.R:353:3'): get_variance ───────────────────────────────── get_variance_random(m1) (`actual`) not equal to c(var.random = 1698.084) (`expected`). `actual`: 17503.7 `expected`: 1698.1 ── Failure ('test-lmer.R:377:3'): get_variance ───────────────────────────────── get_variance_slope(m1) (`actual`) not equal to c(var.slope.Subject.Days = 35.07171) (`expected`). `actual`: 593.3 `expected`: 35.1 ── Failure ('test-lmer.R:388:3'): get_variance ───────────────────────────────── suppressWarnings(get_variance(m2)) (`actual`) not equal to list(...) (`expected`). `actual` is length 6 `expected` is length 5 names(actual) | names(expected) [1] "var.fixed" | "var.fixed" [1] [2] "var.random" - [3] "var.residual" | "var.residual" [2] [4] "var.distribution" | "var.distribution" [3] [5] "var.dispersion" | "var.dispersion" [4] `actual$var.random` is a double vector (2058.53584626217) `expected$var.random` is absent `actual$var.residual`: 686.2 `expected$var.residual`: 941.8 `actual$var.distribution`: 686.2 `expected$var.distribution`: 941.8 `actual$var.intercept`: 686.2 686.2 686.2 `expected$var.intercept`: 0.0 1357.4 24.4 ── Failure ('test-lmer.R:558:3'): get_predicted_ci: warning when model matrix and varcovmat do not match ── head(data.frame(p)$Predicted) (`actual`) not equal to known$Predicted (`expected`). `actual`: 37.586 47.556 56.800 65.318 73.111 80.177 `expected`: 37.534 47.957 58.789 70.029 81.677 93.735 [ FAIL 27 | WARN 507 | SKIP 72 | PASS 3414 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc