Last updated on 2025-09-14 07:51:06 CEST.
| Package | ERROR | OK |
|---|---|---|
| inDAGO | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(inDAGO)
The following packages are not installed: Rsubread, Rfastp, HTSFilter.
To enable all the features of inDAGO, install with:
if (!requireNamespace('BiocManager', quietly=TRUE))
install.packages('BiocManager')
BiocManager::install(c("Rsubread", "Rfastp", "HTSFilter"))
>
> test_check("inDAGO")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-inDAGO_shiny.R:4:3'): Shiny app is generated ───────────────────
Error in `inDAGO()`: The following packages are not installed: Rsubread, Rfastp, HTSFilter.
To enable all the features of inDAGO install with:
if (!requireNamespace('BiocManager', quietly=TRUE))
install.packages('BiocManager')
BiocManager::install(c("Rsubread", "Rfastp", "HTSFilter"))
Backtrace:
▆
1. ├─testthat::expect_s3_class(inDAGO(), "shiny.appobj") at test-inDAGO_shiny.R:4:3
2. │ └─testthat::quasi_label(enquo(object), arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─inDAGO::inDAGO()
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.0.1
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'Rfastp', 'Rsubread'
Flavor: r-oldrel-macos-x86_64
Version: 1.0.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(inDAGO)
The following packages are not installed: Rsubread, Rfastp.
To enable all the features of inDAGO, install with:
if (!requireNamespace('BiocManager', quietly=TRUE))
install.packages('BiocManager')
BiocManager::install(c("Rsubread", "Rfastp"))
>
> test_check("inDAGO")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-inDAGO_shiny.R:4:3'): Shiny app is generated ───────────────────
Error in `inDAGO()`: The following packages are not installed: Rsubread, Rfastp.
To enable all the features of inDAGO install with:
if (!requireNamespace('BiocManager', quietly=TRUE))
install.packages('BiocManager')
BiocManager::install(c("Rsubread", "Rfastp"))
Backtrace:
▆
1. ├─testthat::expect_s3_class(inDAGO(), "shiny.appobj") at test-inDAGO_shiny.R:4:3
2. │ └─testthat::quasi_label(enquo(object), arg = "object")
3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
4. └─inDAGO::inDAGO()
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 0 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64