CRAN Package Check Results for Package fbar

Last updated on 2025-06-04 07:48:27 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6.0 28.59 289.72 318.31 ERROR
r-devel-linux-x86_64-debian-gcc 0.6.0 17.07 185.50 202.57 ERROR
r-devel-linux-x86_64-fedora-clang 0.6.0 560.04 OK
r-devel-linux-x86_64-fedora-gcc 0.6.0 599.34 OK
r-devel-windows-x86_64 0.6.0 24.00 333.00 357.00 ERROR
r-patched-linux-x86_64 0.6.0 25.13 292.00 317.13 OK
r-release-linux-x86_64 0.6.0 27.37 290.93 318.30 OK
r-release-macos-arm64 0.6.0 150.00 OK
r-release-macos-x86_64 0.6.0 328.00 OK
r-release-windows-x86_64 0.6.0 25.00 261.00 286.00 OK
r-oldrel-macos-arm64 0.6.0 155.00 OK
r-oldrel-macos-x86_64 0.6.0 292.00 OK
r-oldrel-windows-x86_64 0.6.0 36.00 411.00 447.00 ERROR

Check Details

Version: 0.6.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [27s/280s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > suppressMessages(library(testthat)) > > test_check("fbar") Loading required package: fbar [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • known theoretical issue (2): 'test-full-size.R:36:3', 'test-full-size.R:46:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iJO1366.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iJO1366.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iAF1260.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iAF1260.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/api/v2/models/iND750/download ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/api/v2/models/iND750/download' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/e_coli_core.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/e_coli_core.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/RECON1.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/RECON1.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.6.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [17s/263s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > suppressMessages(library(testthat)) > > test_check("fbar") Loading required package: fbar [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • known theoretical issue (2): 'test-full-size.R:36:3', 'test-full-size.R:46:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iJO1366.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iJO1366.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iAF1260.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iAF1260.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/api/v2/models/iND750/download ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/api/v2/models/iND750/download' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/e_coli_core.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/e_coli_core.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/RECON1.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/RECON1.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.6.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [127s] Running the tests in 'tests/testthat.R' failed. Complete output: > suppressMessages(library(testthat)) > > test_check("fbar") Loading required package: fbar [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • known theoretical issue (2): 'test-full-size.R:36:3', 'test-full-size.R:46:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iJO1366.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iJO1366.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iAF1260.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iAF1260.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/api/v2/models/iND750/download ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/api/v2/models/iND750/download' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/e_coli_core.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/e_coli_core.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/RECON1.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/RECON1.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] Error: Test failures Execution halted Flavor: r-devel-windows-x86_64

Version: 0.6.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [136s] Running the tests in 'tests/testthat.R' failed. Complete output: > suppressMessages(library(testthat)) > > test_check("fbar") Loading required package: fbar [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] ══ Skipped tests (2) ═══════════════════════════════════════════════════════════ • known theoretical issue (2): 'test-full-size.R:36:3', 'test-full-size.R:46:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iJO1366.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iJO1366.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/iAF1260.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/iAF1260.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/api/v2/models/iND750/download ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/api/v2/models/iND750/download' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/e_coli_core.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/e_coli_core.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") ── Error ('test-utilities.R:27:5'): Works correctly with http://bigg.ucsd.edu/static/models/RECON1.json ── Error in `open.connection(con, "rb")`: cannot open the connection to 'http://bigg.ucsd.edu/static/models/RECON1.json' Backtrace: ▆ 1. └─fbar::get_BiGG(address) at test-utilities.R:27:5 2. └─jsonlite::fromJSON(address) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_con(txt, bigint_as_char) 6. ├─base::open(con, "rb") 7. └─base::open.connection(con, "rb") [ FAIL 5 | WARN 10 | SKIP 2 | PASS 41 ] Error: Test failures Execution halted Flavor: r-oldrel-windows-x86_64