CRAN Package Check Results for Maintainer ‘Craig Gower-Page <craig.gower-page at roche.com>’

Last updated on 2025-02-11 07:48:46 CET.

Package	ERROR	NOTE	OK
diffdf			13
rbmi	1	1	11

Package diffdf

Current CRAN status: OK: 13

Package rbmi

Current CRAN status: ERROR: 1, NOTE: 1, OK: 11

Additional issues

M1mac

Version: 1.3.1
Check: DESCRIPTION meta-information
Result: NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘analyse.R’ ‘lsmeans.R’ Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.4.0
Check: tests
Result: ERROR Running ‘testthat.R’ [174s/248s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(rbmi) > > test_check("rbmi") mmrm() registered as emmeans extension [ FAIL 4 | WARN 0 | SKIP 15 | PASS 1261 ] ══ Skipped tests (15) ══════════════════════════════════════════════════════════ • On CRAN (1): 'test-mmrm.R:337:5' • is_full_test() is not TRUE (14): 'test-draws.R:115:5', 'test-fullusage.R:43:5', 'test-fullusage.R:117:5', 'test-fullusage.R:209:5', 'test-fullusage.R:300:5', 'test-fullusage.R:431:5', 'test-fullusage.R:520:5', 'test-fullusage.R:675:5', 'test-mcmc.R:327:5', 'test-mcmc.R:504:5', 'test-mcmc.R:635:5', 'test-parallel.R:8:5', 'test-reproducibility.R:9:5', 'test-reproducibility.R:135:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-draws.R:144:9'): bayes ───────────────────────────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: unable to load shared object '/tmp/RtmpBEQrRR/working_dir/RtmpXQXMbb/file11f85b3c2c931e.so': libunwind.so.1: cannot open shared object file: No such file or directory Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-draws.R:143:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(d$dat, d$dat_ice, d$vars, meth, quiet = TRUE) at test-draws.R:144:9 4. └─rbmi:::draws.bayes(d$dat, d$dat_ice, d$vars, meth, quiet = TRUE) 5. └─rbmi:::fit_mcmc(...) ── Error ('test-mcmc.R:108:13'): Verbose suppression works ───────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: unable to load shared object '/tmp/RtmpBEQrRR/working_dir/RtmpXQXMbb/file11f85b31bbbe8d.so': libunwind.so.1: cannot open shared object file: No such file or directory Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-mcmc.R:106:5 2. │ └─base::withCallingHandlers(...) 3. ├─utils::capture.output(...) at test-mcmc.R:107:9 4. │ └─base::withVisible(...elt(i)) 5. ├─rbmi::draws(...) at test-mcmc.R:108:13 6. └─rbmi:::draws.bayes(...) 7. └─rbmi:::fit_mcmc(...) ── Error ('test-print.R:102:9'): print - bayesian ────────────────────────────── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: unable to load shared object '/tmp/RtmpBEQrRR/working_dir/RtmpXQXMbb/file11f85b206a5faf.so': libunwind.so.1: cannot open shared object file: No such file or directory Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-print.R:101:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(...) at test-print.R:102:9 4. └─rbmi:::draws.bayes(...) 5. └─rbmi:::fit_mcmc(...) ── Error ('test-reproducibility.R:123:9'): bayes - set.seed produces identical results ── Error in `fit_mcmc(designmat = model_df_scaled[, -1, drop = FALSE], outcome = model_df_scaled[, 1, drop = TRUE], group = data2[[vars$group]], visit = data2[[vars$visit]], subjid = data2[[vars$subjid]], method = method, quiet = quiet)`: unable to load shared object '/tmp/RtmpBEQrRR/working_dir/RtmpXQXMbb/file11f85b63bc8667.so': libunwind.so.1: cannot open shared object file: No such file or directory Backtrace: ▆ 1. ├─base::suppressWarnings(...) at test-reproducibility.R:122:5 2. │ └─base::withCallingHandlers(...) 3. ├─rbmi::draws(dat, dat_ice, vars, meth, quiet = TRUE) at test-reproducibility.R:123:9 4. └─rbmi:::draws.bayes(dat, dat_ice, vars, meth, quiet = TRUE) 5. └─rbmi:::fit_mcmc(...) [ FAIL 4 | WARN 0 | SKIP 15 | PASS 1261 ] Error: Test failures Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc