Last updated on 2026-02-11 07:51:04 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| MetaNet | 4 | 9 | |
| pctax | 6 | 7 |
Current CRAN status: ERROR: 4, OK: 9
Version: 0.2.7
Check: examples
Result: ERROR
Running examples in 'MetaNet-Ex.R' failed
The error most likely occurred in:
> ### Name: get_group_skeleton
> ### Title: Get skeleton network according to a group
> ### Aliases: get_group_skeleton c_net_skeleton skeleton_plot
>
> ### ** Examples
>
> get_group_skeleton(co_net) -> ske_net
Error:
! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─MetaNet::get_group_skeleton(co_net)
2. │ ├─base::suppressWarnings(...)
3. │ │ └─base::withCallingHandlers(...)
4. │ └─... %>% .[V(tmp_go)$name, "n"]
5. ├─tibble::column_to_rownames(., Group)
6. │ ├─base::stopifnot(is.data.frame(.data))
7. │ └─base::is.data.frame(.data)
8. ├─dplyr::count(.)
9. └─dplyr::group_by_(., Group)
10. └─dplyr:::lazy_defunct("group_by")
11. └─lifecycle::deprecate_stop(...)
12. └─lifecycle:::deprecate_stop0(msg)
13. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-devel-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.2.7
Check: examples
Result: ERROR
Running examples in ‘MetaNet-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_group_skeleton
> ### Title: Get skeleton network according to a group
> ### Aliases: get_group_skeleton c_net_skeleton skeleton_plot
>
> ### ** Examples
>
> get_group_skeleton(co_net) -> ske_net
Error:
! `group_by_()` was deprecated in dplyr 0.7.0 and is now defunct.
ℹ Please use `group_by()` instead.
ℹ See vignette('programming') for more help
Backtrace:
▆
1. ├─MetaNet::get_group_skeleton(co_net)
2. │ ├─base::suppressWarnings(...)
3. │ │ └─base::withCallingHandlers(...)
4. │ └─... %>% .[V(tmp_go)$name, "n"]
5. ├─tibble::column_to_rownames(., Group)
6. │ ├─base::stopifnot(is.data.frame(.data))
7. │ └─base::is.data.frame(.data)
8. ├─dplyr::count(.)
9. └─dplyr::group_by_(., Group)
10. └─dplyr:::lazy_defunct("group_by")
11. └─lifecycle::deprecate_stop(...)
12. └─lifecycle:::deprecate_stop0(msg)
13. └─rlang::cnd_signal(...)
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
Current CRAN status: NOTE: 6, OK: 7
Version: 0.1.3
Check: R code for possible problems
Result: NOTE
plot.time_cm: no visible binding for global variable 'id'
plot_two_tree: no visible binding for global variable 'id'
Undefined global functions or variables:
id
Flavors: r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-oldrel-windows-x86_64
Version: 0.1.7
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking: 'ggtreeExtra', 'Mfuzz'
Flavor: r-oldrel-macos-arm64
Version: 0.1.7
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘ggtreeExtra’
Flavor: r-oldrel-macos-x86_64