Last updated on 2026-02-11 07:51:04 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| lme4 | 2 | 2 | 2 | 7 |
Current CRAN status: ERROR: 2, WARN: 2, NOTE: 2, OK: 7
Version: 1.1-38
Check: tests
Result: ERROR
Running ‘AAAtest-all.R’ [39s/46s]
Running ‘HSAURtrees.R’ [2s/3s]
Running ‘REMLdev.R’ [2s/3s]
Running ‘ST.R’ [2s/3s]
Running ‘agridat_gotway.R’ [3s/3s]
Running ‘bootMer.R’ [5s/13s]
Running ‘boundary.R’ [5s/6s]
Running ‘confint.R’ [3s/4s]
Running ‘devCritFun.R’ [2s/3s]
Running ‘drop.R’ [2s/3s]
Running ‘drop1contrasts.R’ [2s/3s]
Running ‘dynload.R’ [0s/0s]
Running ‘elston.R’ [2s/3s]
Running ‘evalCall.R’ [2s/2s]
Running ‘extras.R’ [2s/3s]
Running ‘falsezero_dorie.R’ [2s/3s]
Running ‘fewlevels.R’ [0s/0s]
Running ‘getME.R’ [2s/3s]
Running ‘glmer-1.R’ [3s/4s]
Running ‘glmerControlPass.R’ [4s/5s]
Running ‘glmerWarn.R’ [3s/3s]
Running ‘glmmExt.R’ [5s/7s]
Running ‘glmmWeights.R’ [5s/6s]
Running ‘hatvalues.R’ [2s/3s]
Running ‘is.R’ [2s/3s]
Running ‘lmList-tst.R’ [2s/3s]
Running ‘lme4_nlme.R’ [3s/4s]
Running ‘lmer-0.R’ [2s/3s]
Running ‘lmer-1.R’ [2s/2s]
Running ‘lmer-conv.R’ [2s/2s]
Running ‘lmer2_ex.R’ [2s/3s]
Running ‘methods.R’ [3s/4s]
Running ‘minval.R’ [2s/2s]
Running ‘modFormula.R’ [3s/4s]
Running ‘nbinom.R’ [2s/3s]
Running ‘nlmer-conv.R’ [2s/2s]
Running ‘nlmer.R’ [2s/2s]
Running ‘offset.R’ [3s/3s]
Running ‘optimizer.R’ [4s/5s]
Running ‘polytomous.R’ [2s/2s]
Running ‘prLogistic.R’ [2s/2s]
Running ‘predict_basis.R’ [2s/3s]
Running ‘predsim.R’ [3s/3s]
Running ‘priorWeights.R’ [4s/5s]
Running ‘priorWeightsModComp.R’ [3s/4s]
Running ‘profile-tst.R’ [2s/2s]
Running ‘refit.R’ [2s/3s]
Running ‘resids.R’ [2s/3s]
Running ‘respiratory.R’ [5s/7s]
Running ‘simulate.R’ [2s/2s]
Running ‘test-glmernbref.R’ [3s/3s]
Running ‘testOptControl.R’ [2s/3s]
Running ‘testcolonizer.R’ [2s/3s]
Running ‘testcrab.R’ [7s/9s]
Running ‘throw.R’ [3s/4s]
Running ‘varcorr.R’ [2s/3s]
Running ‘vcov-etc.R’ [2s/3s]
Running the tests in ‘tests/AAAtest-all.R’ failed.
Complete output:
> if (base::require("testthat", quietly = TRUE)) {
+ pkg <- "lme4"
+ require(pkg, character.only=TRUE, quietly=TRUE)
+ if(getRversion() < "3.5.0") { withAutoprint <- identity ; prt <- print } else { prt <- identity }
+ if(Sys.getenv("USER") %in% c("maechler", "bbolker")) withAutoprint({
+ ## for developers' sake:
+ lP <- .libPaths() # ---- .libPaths() : ----
+ prt(lP)
+ ## ---- Entries in .libPaths()[1] : ----
+ prt(list.files(lP[1], include.dirs=TRUE))
+ prt(sessionInfo())
+ prt(packageDescription("Matrix"))
+ ## 'lme4' from packageDescription "file" :
+ prt(attr(packageDescription("lme4"), "file"))
+ })
+ test_check(pkg)
+ ##======== ^^^
+ print(warnings()) # TODO? catch most of these by expect_warning(..)
+ } else {
+ cat( "package 'testthat' not available, cannot run unit tests\n" )
+ }
Saving _problems/test-methods-877.R
[ FAIL 1 | WARN 5 | SKIP 4 | PASS 674 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-eval.R:2:1'
• empty test (3): , ,
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-methods.R:875:3'): rstudent matches for zero-var cases ───────
Expected `suppressWarnings(rstudent(glmer_zero))` to equal `rstudent(glm_zero)`.
Differences:
76/120 mismatches (average diff: 0.131)
[1] 1.355 - 1.549 == -0.1941
[2] -0.772 - -0.732 == -0.0394
[3] 0.866 - 0.952 == -0.0869
[4] -0.791 - -0.749 == -0.0423
[5] 0.842 - 0.924 == -0.0818
[7] 0.323 - 0.339 == -0.0163
[8] -0.831 - -0.783 == -0.0482
[10] 0.784 - 0.854 == -0.0698
[11] 0.278 - 0.291 == -0.0125
...
[ FAIL 1 | WARN 5 | SKIP 4 | PASS 674 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1-38
Check: tests
Result: ERROR
Running ‘AAAtest-all.R’ [100s/102s]
Running ‘HSAURtrees.R’
Running ‘REMLdev.R’
Running ‘ST.R’
Running ‘agridat_gotway.R’
Running ‘bootMer.R’ [12s/20s]
Running ‘boundary.R’ [14s/14s]
Running ‘confint.R’
Running ‘devCritFun.R’
Running ‘drop.R’
Running ‘drop1contrasts.R’
Running ‘dynload.R’ [12s/12s]
Running ‘elston.R’
Running ‘evalCall.R’
Running ‘extras.R’
Running ‘falsezero_dorie.R’
Running ‘fewlevels.R’
Running ‘getME.R’
Running ‘glmer-1.R’
Running ‘glmerControlPass.R’ [10s/10s]
Running ‘glmerWarn.R’
Running ‘glmmExt.R’ [13s/13s]
Running ‘glmmWeights.R’ [13s/13s]
Running ‘hatvalues.R’
Running ‘is.R’
Running ‘lmList-tst.R’
Running ‘lme4_nlme.R’
Running ‘lmer-0.R’
Running ‘lmer-1.R’
Running ‘lmer-conv.R’
Running ‘lmer2_ex.R’
Running ‘methods.R’
Running ‘minval.R’
Running ‘modFormula.R’
Running ‘nbinom.R’
Running ‘nlmer-conv.R’
Running ‘nlmer.R’
Running ‘offset.R’
Running ‘optimizer.R’
Running ‘polytomous.R’
Running ‘prLogistic.R’
Running ‘predict_basis.R’
Running ‘predsim.R’
Running ‘priorWeights.R’
Running ‘priorWeightsModComp.R’
Running ‘profile-tst.R’
Running ‘refit.R’
Running ‘resids.R’
Running ‘respiratory.R’ [12s/12s]
Running ‘simulate.R’
Running ‘test-glmernbref.R’
Running ‘testOptControl.R’
Running ‘testcolonizer.R’
Running ‘testcrab.R’ [14s/14s]
Running ‘throw.R’
Running ‘varcorr.R’
Running ‘vcov-etc.R’
Running the tests in ‘tests/AAAtest-all.R’ failed.
Complete output:
> if (base::require("testthat", quietly = TRUE)) {
+ pkg <- "lme4"
+ require(pkg, character.only=TRUE, quietly=TRUE)
+ if(getRversion() < "3.5.0") { withAutoprint <- identity ; prt <- print } else { prt <- identity }
+ if(Sys.getenv("USER") %in% c("maechler", "bbolker")) withAutoprint({
+ ## for developers' sake:
+ lP <- .libPaths() # ---- .libPaths() : ----
+ prt(lP)
+ ## ---- Entries in .libPaths()[1] : ----
+ prt(list.files(lP[1], include.dirs=TRUE))
+ prt(sessionInfo())
+ prt(packageDescription("Matrix"))
+ ## 'lme4' from packageDescription "file" :
+ prt(attr(packageDescription("lme4"), "file"))
+ })
+ test_check(pkg)
+ ##======== ^^^
+ print(warnings()) # TODO? catch most of these by expect_warning(..)
+ } else {
+ cat( "package 'testthat' not available, cannot run unit tests\n" )
+ }
Saving _problems/test-methods-877.R
[ FAIL 1 | WARN 5 | SKIP 4 | PASS 674 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (1): 'test-eval.R:2:1'
• empty test (3): , ,
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-methods.R:875:3'): rstudent matches for zero-var cases ───────
Expected `suppressWarnings(rstudent(glmer_zero))` to equal `rstudent(glm_zero)`.
Differences:
76/120 mismatches (average diff: 0.131)
[1] 1.355 - 1.549 == -0.1941
[2] -0.772 - -0.732 == -0.0394
[3] 0.866 - 0.952 == -0.0869
[4] -0.791 - -0.749 == -0.0423
[5] 0.842 - 0.924 == -0.0818
[7] 0.323 - 0.339 == -0.0163
[8] -0.831 - -0.783 == -0.0482
[10] 0.784 - 0.854 == -0.0698
[11] 0.278 - 0.291 == -0.0125
...
[ FAIL 1 | WARN 5 | SKIP 4 | PASS 674 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1-38
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘autoscale.Rmd’ using rmarkdown
--- finished re-building ‘autoscale.Rmd’
--- re-building ‘lmerperf.Rmd’ using rmarkdown
--- finished re-building ‘lmerperf.Rmd’
--- re-building ‘Theory.Rnw’ using knitr
--- finished re-building ‘Theory.Rnw’
--- re-building ‘lmer.Rnw’ using knitr
Error: processing vignette 'lmer.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'lmer.tex' failed.
LaTeX errors:
! LaTeX Error: File `blkarray.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.27 \usepackage
{array}^^M
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘lmer.Rnw’
--- re-building ‘PLSvGLS.Rnw’ using Sweave
--- finished re-building ‘PLSvGLS.Rnw’
SUMMARY: processing the following file failed:
‘lmer.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavors: r-release-macos-arm64, r-oldrel-macos-arm64
Version: 1.1-38
Check: installed package size
Result: NOTE
installed size is 27.4Mb
sub-directories of 1Mb or more:
R 1.6Mb
doc 1.6Mb
libs 22.0Mb
testdata 1.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64