9c76e1046170ccff9a00eb7a346b8413 *DESCRIPTION
5405f88e59932eb0d034f38015776844 *LICENSE
a39de64be316fd6934526a474c30fa02 *NAMESPACE
a1b897123eeb4a41084dbd9bc705c1ec *NEWS.md
b46478fb30e0665d264e905c1e450f16 *R/analyze.R
b2675264d481b43ba49fe0fbb09009b3 *R/assumptions.R
5c79866c1cec8cb0e552a1f5f6b2a870 *R/batched_analyze.R
6835093a1befe01cacfbcbacb17f8f71 *R/batched_assumptions.R
90d59e5bb5de5e514bad7fd1a6f96049 *R/batched_audit.R
b76bb332548672c601fbd94e11438978 *R/batched_compare.R
ed4e80a2f683e321c494fa64586d029d *R/batched_design.R
6be43d3f614526fbf30feaf7fff0031c *R/batched_power.R
4377260b0d360689bba7b4d40c528d57 *R/batched_simulate.R
5f313ef4f1577ca0ff5a754208718533 *R/batched_utils.R
f26afed99a579ec15c7d2ebf9dccde0f *R/component_analyze.R
3fac1d4d430b609f5bca2c8f03414850 *R/component_assumptions.R
3604eb1d648bfe43c8a4fc1123377d00 *R/component_audit.R
299a0d1de7659a83d67e614032fddf6c *R/component_compare.R
2ddaf129557288ed3efc16b25fe196a4 *R/component_design.R
f50381628fea47a7ba99160c8f9e745e *R/component_power.R
e3df62acece9394770bba63e206df25a *R/component_resources.R
ab00714a8541faafed0af1cdcbed71bb *R/component_simulate.R
487968bb9fc2cb64cbf091fcbc1dca3b *R/component_utils.R
890815d62db489a4ebb5c1cdf7eb5e20 *R/data_tools.R
dc9913e9fa713a2b5b5f9f18e08113a9 *R/deprecate.R
27fa3c4a12f226d1c999c7fc79d65241 *R/design.R
17bbdc4d1bdf1ca03ff29df254596d95 *R/fit_diagnostics.R
aeb4bf54dbaa4df9194eee5af83d8856 *R/grid.R
c802292bedf0b1bca936de3253ce33cd *R/icc.R
cc0ff6bbe7d6b631b9fb6da937e8961d *R/models.R
133fb539d7261270daaae0b6fc3903ea *R/multistage_analyze.R
11634b34f531516c2b4a0593740156d2 *R/multistage_assumptions.R
3ee57c82a6df9f2587c47f5260cfc606 *R/multistage_audit.R
1ac2753313bf46986b2d7ee410431ef8 *R/multistage_compare.R
379e341cc09aa166e95480b866a9797e *R/multistage_design.R
cc148df451322634383eecaa7103129d *R/multistage_power.R
9daa5674583a6bcc210f691a6356638c *R/multistage_simulate.R
7f308cb0b36a4942dd0f8f53e4766c82 *R/parallel_utils.R
ba82791ac5f4dfcc41a2be2ef4a87730 *R/power.R
7ae02fa725caf2d8aa10b9d39d893f85 *R/power_engine.R
e6309e5372ba342faef4cf5a5b41ff9d *R/simulate.R
7bc6ac4e40bb7029499dc2b64921967b *R/stepwedgepower-package.R
f54a4fe3f136fbca5ce4a590cb060454 *R/utils.R
f9b1e56fd4d9f99a54072d5544a9b37d *R/validate.R
90b7c6e831dde59aa4ac73b3c10fdabb *README.md
21c9401b8c07f38d762ade4612fc4ffe *build/partial.rdb
24aecc00d94e6311f270720a51bac2c1 *build/vignette.rds
7b9f595d25d4cf4eb2770ed0e154cf2f *inst/CITATION
a633ba3f2a470926cc3cf89e60f7933f *inst/benchmarks/README.md
e86fe4454f8fd882a4beba424d5a0bed *inst/benchmarks/benchmark_helpers.R
4a317b88c031960d8d84c82acf5792c7 *inst/benchmarks/figure3_calendar_delay.R
4c30774a439286d02268af1ce6fd491a *inst/benchmarks/figure5_limited_clusters.R
1d62fdfda222680cb311c6b02b3d8a3f *inst/benchmarks/reference/benchmark_manifest.csv
df0230fd7db10f1090d20b90e2570361 *inst/benchmarks/reference/figure3_reference.csv
adb581f232f99338512d76127759b679 *inst/benchmarks/reference/figure5_reference.csv
f710f110e1c7d812c629a460123e7ee7 *inst/benchmarks/reference/reference_environment.csv
43424b8a1c3088a78f89b6484d12777a *inst/benchmarks/reference/source_discrepancies.csv
69fe701f06926ee0d3a321df70fc4e61 *inst/benchmarks/reference/table2_reference.csv
bb41d38351cd7fb5dfb87ff238d52317 *inst/benchmarks/reference/table3_reference.csv
760f8d6a4277422b8364f5e079a77982 *inst/benchmarks/run_all.R
48800b29503d4a98d5c9abe4fabe0358 *inst/benchmarks/table2_software_comparison.R
7e2adb9b9a0ef70685185d4f149f0bad *inst/benchmarks/table3_separate_time_grid.R
07ba98efd6aa8b9cbced76a6dff5bc6c *inst/doc/asynchronous-a-ab.R
0c4df891dcb963497c97815e4c500aec *inst/doc/asynchronous-a-ab.Rmd
2525b0918a200737e01a4529f6e53b59 *inst/doc/asynchronous-a-ab.html
cbf6702cdc52d097d1fabb4bafbeebde *inst/doc/batched-stepped-wedge-designs.R
8c5a5555d96a648fcb5d8b6bb4a11c7d *inst/doc/batched-stepped-wedge-designs.Rmd
771c150bda5ea145e6b5c63c4d1a09f1 *inst/doc/batched-stepped-wedge-designs.html
abc7fa614d872c806c4f36fe2ff1cf2f *inst/doc/benchmark-validation.R
9b9aa4c03f6842a9a82f53a03356316e *inst/doc/benchmark-validation.Rmd
8d5a5af40b1cc0e2e9c9cd3dd79a3c26 *inst/doc/benchmark-validation.html
a6a3c92cb3ba9000e05ef0bbf1cba467 *inst/doc/component-four-state.R
d3c093a7fe6eca0695f98496fbcad946 *inst/doc/component-four-state.Rmd
0a61dcda3beb971134e6ae119083b50e *inst/doc/component-four-state.html
af7bf5f83736b4fe935c8c4a270d2537 *inst/doc/lpa-case-study.R
a972af67088ef650e82ce345999e4e81 *inst/doc/lpa-case-study.Rmd
55e652235670091000ad198249a1bdcd *inst/doc/lpa-case-study.html
8060e4d83b8073721946198aeffb1907 *inst/doc/stepped-wedge-design.R
04420b19121ae39b0479c5d543e6b977 *inst/doc/stepped-wedge-design.Rmd
c8eb2e012b585ce81e48d2254ce4db6b *inst/doc/stepped-wedge-design.html
de35230e8f5a7c5597807422dc6f63fd *inst/examples/demo_async_A_AB.R
b7a715be8ef705d1e571f1736bc9456d *inst/examples/demo_batched_SWD_BSWD.R
8477f1ba68eb067910b46f05b0b0a5f6 *inst/examples/demo_component_four_state.R
b7a715be8ef705d1e571f1736bc9456d *inst/examples/demo_exact_SWD_BSWD.R
b3d16b1841ea62609f0226c9b9c36179 *inst/extdata/example_physicians.csv
dca74e194eddd6cbbe6271bdf0486351 *inst/scripts/reproduce_lpa_analysis.R
bf1a603ec40d4a036d3f928b00e3a36d *man/analyze_aggregated_outcomes.Rd
69cfa870ab03b33810a234689d7c2c02 *man/analyze_lpa_outcomes.Rd
4d6d96b771a1b28438d35e6339a57579 *man/analyze_swcrt.Rd
9678c91c7b194337261fe6e90223f1be *man/as_component_design.Rd
947c0d51d41b3b8747637722a824e4c5 *man/audit_batched_design.Rd
77f444055e59b0c0fa49aa9757f7f2a2 *man/audit_component_design.Rd
498f367c3770d382e356cdc0cc12239c *man/audit_multistage_design.Rd
b15bb59aefe6a89715b2a4391e4f3978 *man/cluster_sd_to_icc.Rd
ef46bcb145b559c4848178ae4485600e *man/compare_batched_designs.Rd
b033974e4accea6e4386b25380786f34 *man/compare_component_designs.Rd
cf089004b426b04674b44c28ee362d6c *man/compare_multistage_designs.Rd
52b8b00c09dbe8188b2838dcd8170e7d *man/compare_with_swdpwr.Rd
b0cc95c5d8086ae831b763bbd8939077 *man/component_resource_summary.Rd
4d9723aa1631728602f23b4f615432d2 *man/estimate_group_rates.Rd
86fe8d2eec8c3169afb30af977303de3 *man/estimate_power.Rd
0a18da5811d8eef84e92c786fd24ab58 *man/estimate_specialty_rates.Rd
5dad2b0c84ddd5fd0747c51bc0086353 *man/estimate_type1_error.Rd
3db45767cfa57afbabc087699c3eaf98 *man/fit_batched_model.Rd
b76dceebb603fcedc492f124473bec32 *man/fit_component_model.Rd
75424ef77493fc545149927910f9f6da *man/fit_grouped_rate_model.Rd
c7c86e0641a4e5d5ccd08b2eac32de89 *man/fit_multistage_model.Rd
7c4762aedf9383c84061b41b40ec38fe *man/fit_specialty_rate_model.Rd
39743820d74ba51d470d8b66736dde3f *man/fit_stepwedge_model.Rd
900af427e3dd105acd5ba8d07981953b *man/icc_to_cluster_sd.Rd
2e42e2006f94a40fbf6b75917734876d *man/power_batched_swcrt.Rd
70a8edf94683252c431190f953eaf529 *man/power_component_swcrt.Rd
174b2182ee89b7baff9e1d1b2c111fb3 *man/power_grid.Rd
52eedb3fdd40f0e288ed3625ef47d62b *man/power_multistage_swcrt.Rd
1910c632d3292422ee50c34b9d10f42c *man/power_swcrt.Rd
d90943190509a7ca26c0a12e1c08218a *man/prepare_cluster_data.Rd
f16090e99f65e547290bd841d1b2a7d8 *man/prepare_physician_data.Rd
ffaf3271c9dc1b781a31fb7934855e5f *man/read_example_physician_data.Rd
e1bed50dcbe40b13da471689cbdb098b *man/run_stepwedge_analysis.Rd
bec1bac2fe954b67d7706d10c1f6238e *man/simulate_batched_swcrt.Rd
28b8e9c28c1f67673813d9b3558842ad *man/simulate_component_swcrt.Rd
f2548cba17963ad25c50a6d526866154 *man/simulate_multistage_swcrt.Rd
0df7a23b649338b7da149ae95579acf2 *man/simulate_stepwedge_trial.Rd
473d810b44f221820a2d3ecff72ba0ad *man/simulate_swcrt.Rd
d613d41fdfd60690cbae9782436f7fdc *man/stepwedgepower-package.Rd
bcaf2702d5c6bf09173783c46b890863 *man/summarize_by_group.Rd
8632d9495b3fbab97d7991c7fc9b7611 *man/summarize_by_specialty.Rd
98c9bcc8d793da2560490d1a661f3339 *man/sw_assumptions.Rd
e2926422ed619cb941a4e1ddd9cba64e *man/sw_batched_assumptions.Rd
995fc80c26152a4493cbc721ed112856 *man/sw_batched_design.Rd
0b7e0e9eb93e2403746914bfb7fbf6ab *man/sw_component_assumptions.Rd
abd33f334c2ab63ffd06281eee718f88 *man/sw_component_design.Rd
40a313d55439307e1d9acb7f9c4f1774 *man/sw_component_power.Rd
06921f13ee2db89a2317549ee75813b6 *man/sw_design.Rd
5d4b39ffd8e65204df77dd36a271c610 *man/sw_incomplete_component_design.Rd
5302100be1daeddeb83980d32488c6d8 *man/sw_multistage_assumptions.Rd
a39acb60b1a7f7e0cff4a4954462cedc *man/sw_multistage_design.Rd
de1b88d8ff2c26b54bebfa582a58afac *man/sw_multistage_power.Rd
ceac8f44194ed24c948ffee9e3a9b4c0 *man/sw_power.Rd
6cd58e883b9873a3007338bc610e40f8 *man/type1_component_swcrt.Rd
1a1da154059b5efff5bea476ee936bd3 *man/type1_multistage_swcrt.Rd
bc6290e11440ecec043108fe29e11ac6 *man/validate_engine.Rd
32679575ebf3879fdb149c8c732a1848 *tests/testthat.R
cf91898b6a028b0e080bb2f3312c0ecd *tests/testthat/test-batched.R
7188ceef21b9b6a34defcea676f7a454 *tests/testthat/test-benchmark-module.R
29749e769561e5af04d7122b74c5cfef *tests/testthat/test-component.R
6caad9ff7faf6ab1f2384a354be39f69 *tests/testthat/test-core.R
a695c25151e9d6f643c3bf1762a45506 *tests/testthat/test-generic-tools.R
934a2a40c7adda9c8e3bb685eed01ae2 *tests/testthat/test-grid.R
a9627e6de853c5bee86442fdcfbcd995 *tests/testthat/test-multistage.R
46dab2e0358b20153d9b389a759580bb *tests/testthat/test-swcrt.R
6a55342b74389ef011b4a90d422c9a07 *tests/testthat/test-validate.R
0c4df891dcb963497c97815e4c500aec *vignettes/asynchronous-a-ab.Rmd
8c5a5555d96a648fcb5d8b6bb4a11c7d *vignettes/batched-stepped-wedge-designs.Rmd
9b9aa4c03f6842a9a82f53a03356316e *vignettes/benchmark-validation.Rmd
d3c093a7fe6eca0695f98496fbcad946 *vignettes/component-four-state.Rmd
a972af67088ef650e82ce345999e4e81 *vignettes/lpa-case-study.Rmd
04420b19121ae39b0479c5d543e6b977 *vignettes/stepped-wedge-design.Rmd
