622875586d3547d44a5a005182cd17fa *DESCRIPTION
2f75cb29532fc4abd265edcecaf6d403 *LICENSE
691089990cd791ba472beb80546aee93 *NAMESPACE
6baa14b33e15676f92656f6a6fc62ffc *NEWS.md
d8b857685c1a0fcde26d869f50bc603a *R/calculate_complexities.R
f4bb045e30b856ca349b7286847490da *R/calculate_diversities.R
08eb42f70b362ca6dd7e23f0649aa912 *R/create_binary_matrix.R
7f19b54c28da11741fdf263067712e98 *R/data.R
e0ef681901465d24f47f9139cb2c086a *R/hagis-package.R
08387eb20fb6e4d4d23cd0689290c248 *R/internal_functions.R
bcf2d755d7f65b6297a5241caa2e623c *R/summarize_gene.R
b8a7af1dd0c58a426a8cadd004a09237 *R/utils-data-table.R
b05a7c10fe036a9bbecd5d3f5ece6d3c *README.md
0c6ad5b3446721162c89589e8077ab1c *build/partial.rdb
1b8e8915ee6d497e82e9b9dde7d5a5a6 *build/vignette.rds
c2b85e2b137574125f4ba591e44eb914 *data/P_sojae_survey.rda
1eded803510a7cf69f31ed675d4fa587 *data/sample_meta.rda
cfabb800e9111be1a8be2114e3884b89 *inst/CITATION
277100453376cc8881119140ddd6ea18 *inst/WORDLIST
1f98b44727209cbf5fed06857eb65d84 *inst/doc/betadiversity.R
bb1982194f2048966fb6eb787fd28211 *inst/doc/betadiversity.Rmd
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cdf5411d82349b2f3bd1b95d3dc37b30 *inst/doc/hagis.Rmd
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01b8a7ad0dc77b0022134bef085586a3 *inst/paper/author-info-blocks.lua
7a79db5af7bb3d77678e7b988425d876 *inst/paper/molecular-plant-microbe-interactions.csl
acc87d55e6b82bc238694dd573857e98 *inst/paper/paper.Rmd
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2d0dabcf0f478848ee92b779adceaf2b *man/P_sojae_survey.Rd
7ccb43a8631e50fa7f98d17731c531cc *man/autoplot.hagis.complexities.Rd
75db5d00c98be833b68fc4652183a1ca *man/autoplot.hagis.gene.summary.Rd
82bdcd62108b6e58fd88f1c01b6b5a27 *man/calculate_complexities.Rd
57b8ba34b3a14b7b3687770730677a00 *man/calculate_diversities.Rd
df1d9af97d98960c138dae1d1efcee13 *man/create_binary_matrix.Rd
286bbdc5631a6cd7938718b094f4bc98 *man/diversities_table.Rd
32ffb7349a5b0d85dcd3a3555654e6ee *man/hagis-package.Rd
3dd429b1029203da52a37e552ec0f830 *man/individual_pathotypes.Rd
a7323a4479e11722d6fd32d02aaee208 *man/reexports.Rd
7e7b3f9163c022741e991f669e2a5afe *man/sample_meta.Rd
867eb048128ea3ed34da26754ce982c6 *man/summarize_gene.Rd
ac9a5657202b592579c61f5f8ac133db *tests/testthat.R
885762d0e694c0b1a3554a21a4e9eed5 *tests/testthat/test-autoplot_hagis_complexities.R
42185c99b95ffb6220fe4554e5626418 *tests/testthat/test-autoplot_rps_summary.R
e605be352dbe173b90d095f4e2f90a4e *tests/testthat/test-calculate_complexities.R
ba860802b71c7e5cd87c4d6453b9b5f6 *tests/testthat/test-calculate_diversities.R
68063d6fe1559f86e944f8c28edff88a *tests/testthat/test-create_binary_matrix.R
26a63922b531077372d7078b5d7a35f3 *tests/testthat/test-diversities_table.R
4d3010d43ad3d6c8082faad0721ccbb5 *tests/testthat/test-individual_pathotypes.R
bb1982194f2048966fb6eb787fd28211 *vignettes/betadiversity.Rmd
cdf5411d82349b2f3bd1b95d3dc37b30 *vignettes/hagis.Rmd
