95409923d46f222765972163315fed01 *DESCRIPTION
62e701b04858afb4a2722aceefe32351 *NAMESPACE
c03dc24f51e9dcbc13d827b806d13aa2 *R/spot.R
05f69510ce7c89f69914e888e9bb8c56 *R/spotAlgStartEs.R
9bb189f694983df06c618d33671dd24f *R/spotAlgStartSann.R
905c0a5d3fce264d6a2b120229659aa4 *R/spotComparison.R
5c66f8421caaf56f8553dda56f997fe0 *R/spotCreateDesignBasicDoe.R
e4207e77928988c7d96745a4a9579398 *R/spotCreateDesignDoeR3.R
945080c0ee7c6d8297152135dc2ef0c0 *R/spotCreateDesignFrF2.R
e4c3ce45cc082958786028d2c25c38df *R/spotCreateDesignLhd.R
76b295cca275b578c1a6a2815b67eea5 *R/spotCreateDesignLhs.R
4c96ab91a8277fab453e6977a68488d1 *R/spotExplainInterfaces.R
e398c6ed17f22e392ba2807b28ebb679 *R/spotFuncStartBranin.R
8c7a0aa54c09360673d9a2bd41c554bc *R/spotFuncStartMexicanHat.R
bdba1a9d0cfcf171d20daf2d2189e051 *R/spotFuncStartRastrigin.R
915e790b9282aea52d1bc1cc0bc79adf *R/spotFuncStartRosenbrock.R
89f4c8e84b67e87f8aae8743c185ef15 *R/spotFuncStartSixHump.R
f57cbdd84def04672618deb2cc863d0a *R/spotFuncStartSphere.R
08dfe2957cb7d69ac18dbcb9bddc37a4 *R/spotFuncTools.R
68866e265ed55159d24815b4cd85067a *R/spotGenerateSequentialDesign.R
8c92b0ece3cf49e0874e52fb516f2271 *R/spotGenerateSequentialDesignOcba.R
54d0c41fbb4338e942bc3e28b03da03b *R/spotGetOptions.R
41dc8ec65cad19dc65f408673ef9d27b *R/spotGui.R
e99abff55e18a87030ee05de8c50a3f9 *R/spotHelpFunctions.R
e6133071672a6b08c81336af36f469c5 *R/spotMeta.R
1094511cf08b4c85140674856af6d1b7 *R/spotOcba.R
a70a9cc1f565f1f0587d1103579f75d4 *R/spotOptim.R
1a1da2c09903a20f963ee04ace6bc5f7 *R/spotPlot.R
a7d93da010c9aa0c3c25d0635b64e7bb *R/spotPredictKrig.R
a1c311d17735b5994fb63400207ae328 *R/spotPredictLm.R
339c62698423d0580af4fa51dedcc4f6 *R/spotPredictLmOptim.R
4df89c2994872cd001aa17358b5603b9 *R/spotPredictMlegp.R
83f1a13b5a2fd1eb471c71c87854ecce *R/spotPredictOptMulti.R
f17de786353d3604018cafc1dc99b02c *R/spotPredictOptMultiNew.R
ed9bd1aab488df042ee16e42bb682ce4 *R/spotPredictRandomForest.R
49adb1a9c6e316d302e48f8b2e06be64 *R/spotPredictRandomForestMlegp.R
e829a88f1146510ed788727cd7b1940c *R/spotPredictTgp.R
ae6a3d5940ce9fdbede46f4a78f2a573 *R/spotPredictTree.R
7d915ce43c492dcf330c4df64a150c8a *R/spotPrepareData.R
79aed44daf927b889832ab43624cfec9 *R/spotReportDefault.R
f71f3a3d21179aad22d3a0ec9e78d63f *R/spotReportMetaDefault.R
981705242a223baa5db80b84aad5697c *R/spotReportSens.R
b90aba59e84e727a4244d9c49f501a46 *R/spotSeqDesignIncreaseMultTwo.R
9b91bfd1cea9353ce577691a001658c5 *R/spotSeqDesignIncreasePlusOne.R
4aa85bbc4f2c33582f7e0d2042e4c4d7 *R/spotStatistics.R
7f0a52f198feb13fe47953936c40db34 *demo/00Index
81e1ae7b6a6f9145f149edae7654921e *demo/spotDemo01TreeBranin.R
ca8aff945fbe749ca278de8158e26efe *demo/spotDemo02RandomForestBranin.R
abf8063122c8b602f87f6eaf958d6a5d *demo/spotDemo03LmBranin.R
06186e004e936a557ba8423d2c07d695 *demo/spotDemo04MlegpBranin.R
c414419e4714dd033a3c58a506ae4bfa *demo/spotDemo05TgpBranin.R
cd392ddfafd91645581921d080106d82 *demo/spotDemo06TreeSann.R
a42fd5bc86739ae380928c12b3f6168d *demo/spotDemo07RandomForestSann.R
5a9028c32176d9e7809c5a13b4c780db *demo/spotDemo08LmSann.R
91a6675a256b2daef2c97676d37abc8c *demo/spotDemo09MlegpSann.R
efc8d338cbac7cf5294bff94d77c2697 *demo/spotDemo10TgpSann.R
ae0d0293acca19983a5a446b256980d8 *demo/spotDemo11Java.R
6100557eea6c5d6278572fa0a07304c9 *demo/spotDemo12Sann.R
ac0a70acb2a937433e302e3d62875e7f *demo/spotDemo14LmOptimSann.R
cfe6cd2a758b99045d8097c992fb9fb4 *demo/spotDemo16EsBranin.R
e7e38ce8c49f4dee7f3ee6cfe9fe51ae *inst/GUI/help.pdf
40a62e14c9d09c81198a3a137201ddbd *inst/GUI/spotGui.jar
8e02c05d5df17fff05dca2ed16a5703b *inst/ReleaseNotesSPOT.txt
beec8a76ace622c1cab683340125b9e7 *inst/demo01TreeBranin/demo01TreeBranin.apd
30aa6d53f46a284dcfc46dad92ce78c7 *inst/demo01TreeBranin/demo01TreeBranin.conf
f68a51742fbee1e4c096b33c07f8477a *inst/demo01TreeBranin/demo01TreeBranin.roi
60ec6cdefe28a80b31d36c1083752f53 *inst/demo02RandomForestBranin/demo02RandomForestBranin.apd
c3b2e4805acadbde544b9ef83c94c8d1 *inst/demo02RandomForestBranin/demo02RandomForestBranin.conf
f68a51742fbee1e4c096b33c07f8477a *inst/demo02RandomForestBranin/demo02RandomForestBranin.roi
f9d33674c7aa6c94871d31fcfabcdd4f *inst/demo03LmBranin/demo03LmBranin.apd
7fc3539b7e371c73d5e5be889b8eb7a0 *inst/demo03LmBranin/demo03LmBranin.conf
f68a51742fbee1e4c096b33c07f8477a *inst/demo03LmBranin/demo03LmBranin.roi
daca7a3a43921b8d2edc5f9590fbfe7d *inst/demo04MlegpBranin/demo04MlegpBranin.apd
feb8fef89def78ee938a31058de18071 *inst/demo04MlegpBranin/demo04MlegpBranin.conf
f68a51742fbee1e4c096b33c07f8477a *inst/demo04MlegpBranin/demo04MlegpBranin.roi
4da2fd73b275a1603ba36a7e627f9c56 *inst/demo05TgpBranin/demo05TgpBranin.apd
89c67245d20c16de23a87e6626a87182 *inst/demo05TgpBranin/demo05TgpBranin.conf
f68a51742fbee1e4c096b33c07f8477a *inst/demo05TgpBranin/demo05TgpBranin.roi
48a4cbc732a589aa103ea918e9909165 *inst/demo06TreeSann/demo06TreeSann.apd
d50a7b7e3b5595b9c83c5a0af642d034 *inst/demo06TreeSann/demo06TreeSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo06TreeSann/demo06TreeSann.roi
fcee7cf4d5def53f563d444e96a83f34 *inst/demo07RandomForestSann/demo07RandomForestSann.apd
32cd667c5e68acf5f8ca7ecf3d1622c0 *inst/demo07RandomForestSann/demo07RandomForestSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo07RandomForestSann/demo07RandomForestSann.roi
460b93aad5034b4adf5016f5bd51e073 *inst/demo08LmSann/demo08LmSann.apd
01187ad73db4f37ba8896daffb7e6942 *inst/demo08LmSann/demo08LmSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo08LmSann/demo08LmSann.roi
88d5e819786ecc28b0d6c7b168508a4a *inst/demo09MlegpSann/demo09MlegpSann.apd
3924ddfda587b7ab9022d8ba8e493543 *inst/demo09MlegpSann/demo09MlegpSann.conf
eb26f60964da129c2fe74fce345ebd9f *inst/demo09MlegpSann/demo09MlegpSann.roi
fc58b81adef80bb8f8868dab8ef5fe8a *inst/demo10TgpSann/demo10TgpSann.apd
e81198336da4476943c1efc44328d29b *inst/demo10TgpSann/demo10TgpSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo10TgpSann/demo10TgpSann.roi
ebdd9cc63b978392c738a7a6f9056107 *inst/demo11Java/bin/README.txt
bef64b9bd9db877b12075fd49eee4823 *inst/demo11Java/bin/simpleOnePlusOneES.jar
ea4d3df1e8c9842f20eac4ceed84a1de *inst/demo11Java/bin/spotAlgStartOnePlusOneEsJava.R
fd13aa0cf30c058f1ceee9665dae2d97 *inst/demo11Java/demo11Java.apd
4a1941e33dae87793f6304d11ca50447 *inst/demo11Java/demo11Java.conf
02b6fca39aa280ae561bede64462b0fc *inst/demo11Java/demo11Java.roi
8b86b241d62c20d77c12962dd7d4ce2a *inst/demo12Sann/sann0001.apd
84e8eaad7c50de1dd5bcda771acffef2 *inst/demo12Sann/sann0001.conf
2ad3a22a655d49b5caa09e643cd71ff5 *inst/demo12Sann/sann0001.roi
c03a629d86e14bf81b215682da15cb7a *inst/demo13RandomForestMlegpSann/demo13RandomForestMlegpSann.apd
48e944a85adb5b1ca2120e2bf2985def *inst/demo13RandomForestMlegpSann/demo13RandomForestMlegpSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo13RandomForestMlegpSann/demo13RandomForestMlegpSann.roi
003ba7c9c64ed910a03a4945cea25946 *inst/demo14LmOptimSann/demo14LmOptimSann.apd
f2698320b41ceb5830aadc3da069fce2 *inst/demo14LmOptimSann/demo14LmOptimSann.conf
3a27c00bdd68608d47d4135c1b348e51 *inst/demo14LmOptimSann/demo14LmOptimSann.roi
3dc6d02b8a0a1e334257b1ceffac9dbb *inst/demo16EsBranin/es1.apd
2c217b9900e0175650ab3c2b2d6802cf *inst/demo16EsBranin/es1.conf
d788e310b3228eedd9379bb32929b96e *inst/demo16EsBranin/es1.roi
77c592139a82f7c63b94db439106ed40 *inst/doc/SPOT.Rnw
056622b1fb746627597cf24ac0f0dd0a *inst/doc/SPOT.pdf
6348a016a1e88db86930df20cf67513e *inst/doc/SPOTmanual.pdf
a345ec4e212eda96d5571978be7771f1 *inst/doc/index.html
3b6b25b5bddb2cbdc64832258ebc4255 *man/SPOT-package.Rd
b7d2e5ba898a9341a2af15886436c1e4 *man/spot.Rd
9b00752df5e8abbf22dec02bf2a97632 *man/spotAlgEs.Rd
8e43375708c73f574f471bb9275ab0a4 *man/spotAlgEsBanana.Rd
77bb7226dcf7e9a6b308f5e9b06b9bb6 *man/spotAlgEsBananaGradient.Rd
eeac3aa51521eb7f98b4c3e2f0b69a1b *man/spotAlgEsDominantReco.Rd
13daa44e57be43562c99e7a640278963 *man/spotAlgEsF.Rd
540a77e05f6527d526b699913d0a31a6 *man/spotAlgEsGetSuccessRate.Rd
eb19538a2678fe6560e707a4f19671ac *man/spotAlgEsHps.Rd
ef1456a5074a0ff0c8f59c3eb74146db *man/spotAlgEsIndividualInitial.Rd
26c1c9e1bbe627381aa6b4cf0359a328 *man/spotAlgEsInitParentPop.Rd
52dc8fc4dbff0a0947fc6d8163294044 *man/spotAlgEsInterReco.Rd
5df5662b68d44c37da131ea2e11e747c *man/spotAlgEsInterRecoBeSw02.Rd
b690174a209e34b7b841ed3021ae24ec *man/spotAlgEsMarriage.Rd
90ba2619323ab026ec95751e1d9c099a *man/spotAlgEsMarriageWithReplace.Rd
c9d557442f5fb507e0c6fb0c49a3be72 *man/spotAlgEsObjMutation.Rd
c8f6bf4d043ca7df1c8d092b4ab1a602 *man/spotAlgEsQuickTest.Rd
ee33fac2d8f9706e220ff47f3fe8e5f2 *man/spotAlgEsRastrigin.Rd
90f781ce9b26505aa93a982203339349 *man/spotAlgEsSelection.Rd
ec56968d0e919b9e57a7405313c2394d *man/spotAlgEsSphere.Rd
50d0bb9da8163681ccce7b5083f8e130 *man/spotAlgEsSphere1.Rd
325327e196226285de4b61ba5dc03eed *man/spotAlgEsStratMutation.Rd
6bff41eb50167a2fc4959c191b723ca1 *man/spotAlgEsTermination.Rd
7c79da26bb255394e20b775358baa574 *man/spotAlgEsWild.Rd
8e5ec9c8d7562498e11cf8e93284277f *man/spotAlgStartAlg....Rd
ceb1e0a092cb88f06aab2e8f33165c68 *man/spotAlgStartEs.Rd
038f78cf806580114d6495fdb36ad857 *man/spotAlgStartSann.Rd
375e06eb503fe29a1aa07fafbb96e168 *man/spotBraninFunction.Rd
ee74e3926bea01c7bfd4bc5557066ffa *man/spotCalcNoise.Rd
813362c4f38c6fc303dcdc04d7f5ba4e *man/spotCompare.Rd
1a8f0d157c642cdd53bd5ea90841aa76 *man/spotCreate....Rd
837badbe2114b0029f039906bc78a4b0 *man/spotCreateDesignBasicDoe.Rd
dd229dbebd911159026cdf7d6e5cbbe4 *man/spotCreateDesignDoeR3.Rd
2c13f3a5a01fc35e1f9341bd4e535ec6 *man/spotCreateDesignFrF2.Rd
ea93d892d6063f32e44f916679496cb4 *man/spotCreateDesignLhd.Rd
8ec1c2cc88b3de3d640cbfec6d62ba8a *man/spotCreateDesignLhs.Rd
d64567d3effa3b15ec137dc78eeeebb3 *man/spotFuncStartBranin.Rd
4f2ad7bcc16a4fdc1d3cf5c5f91ae168 *man/spotFuncStartMexicanHat.Rd
0f16984399b1b4690b3301527bfab40c *man/spotFuncStartRastrigin.Rd
3bc149e393de1d76dd1a1f5fdf6a5fb8 *man/spotFuncStartRosenbrock.Rd
e36957e396bb73f64858b69a017f1c91 *man/spotFuncStartSixHump.Rd
ef9ca24d587afa64afef64355fff8067 *man/spotFuncStartSphere.Rd
c84ab524e2665c6596fe702e48ff637f *man/spotGenerateSequentialDesign.Rd
294381b81069550cb50a02de494b6707 *man/spotGenerateSequentialDesignOcba.Rd
c9d757431231c9d6b88f19c813564453 *man/spotGetAllRepeats.Rd
26eb2646a0c87ab3f837919e7ea25935 *man/spotGetMergedDataMatrixB.Rd
4a82625af953428489554bb363129f1f *man/spotGetOptions.Rd
6d64cd7daea77e820989dd9eedf08b2e *man/spotGetRawDataMatrixB.Rd
f08ffe315b11ae4fc4486c8b793384c6 *man/spotGetRawResData.Rd
c93fd1f2f07cd4ab0a821e79f327ea45 *man/spotGetRepeats.Rd
4313b59190227ed250f5ab6fd453b880 *man/spotGui.Rd
212bdcf624a1d30581356b748769c400 *man/spotHlpF.norm.Rd
3153a7ccb2d405dde1be2b388fdc94db *man/spotHlpF.norminv.Rd
d43d76384913d2cbebca4ca48eb52454 *man/spotInstAndLoadPackages.Rd
bbbe12ef8b2aa14036f1d61a2fba3736 *man/spotInterface....Rd
3cba1e7f105eff64da5c7d4e46e75c69 *man/spotMetaFlattenFbsRow.Rd
cd0485dd117cd498641fdbf63fa392b0 *man/spotMexicanHatFunction.Rd
a38a92db70b47a21dc48605c687cc15d *man/spotNormDesign.Rd
b28222bbebcb8a6f10215fe8813262a6 *man/spotOcba.Rd
0bd6dd6be9ad441f16ecb8dd0bf6a0ce *man/spotOcbaTest.Rd
496bbdd30478bf29a9b6b26d7fe18699 *man/spotOptim.Rd
42feb7f371160481e374c53ce916d0da *man/spotOptimInterface.Rd
d459fd2614223f9e4397e3c17d35079b *man/spotPlotBst.Rd
da64f1e78793a02ba7247d08964d66b4 *man/spotPlotPower.Rd
725347a6d43deba328d2e3795546c559 *man/spotPlotSeverity.Rd
db5699284f881e1861c0bf126c7ccd8e *man/spotPower.Rd
e0fa298c64b42b9461646a43d282f0c3 *man/spotPredict....Rd
733bd86116d3936f0c183bcf66939bf5 *man/spotPredictKrig.Rd
26fa3fdb178f39c75ed6db6f0dd18a3e *man/spotPredictLm.Rd
6808808e8840dceb85270e1ebb6c9993 *man/spotPredictLmOptim.Rd
c373ef87de19fdfa27ff2c619007eda7 *man/spotPredictMlegp.Rd
f6637c50eff7e3816ea5f60dd6e42680 *man/spotPredictOptMulti.Rd
1aa682b5eb7e63370d77219e803cb34c *man/spotPredictOptMultiNew.Rd
c9db6106fe785cf8888c63a789593ef0 *man/spotPredictRandomForest.Rd
b03fe3017402e38741fba605e02dd110 *man/spotPredictRandomForestMlegp.Rd
df63e8f5178c9ff3be4499779e8aa63c *man/spotPredictTgp.Rd
cabf784399909c1c68bf509ecc5ac4f8 *man/spotPredictTree.Rd
f8404c131a46960b0e931f1e60007e3f *man/spotPrepare.Rd
d0e45fb4afa0247c9ae24170fe564682 *man/spotPrepareData.Rd
3bec8e83ec74e28e4ca3f8057277fd7c *man/spotPrepareDataAsMatrixC.Rd
59b8d682077b87b78eabc12798bb8d2b *man/spotPrepareSystem.Rd
84d37fe39714c06a8b9e685c3f5b975e *man/spotPrint.Rd
b07707ee538d64f7ecdbe96f12b4caca *man/spotRastriginFunction.Rd
02eb0beb765a38dca664738f106e921f *man/spotReadAroi.Rd
84c7549828b8c686f95e682e2d0c1c8f *man/spotReadBstFile.Rd
59191f9529d50e9d11ead7b257469a2b *man/spotReadRoi.Rd
8507ee14121b8ef5ec38f6eb6efd0652 *man/spotReportDefault.Rd
c57076b2042193bcdf1f6cd7c1bd6857 *man/spotReportMetaDefault.Rd
4dd625c598eefa99146442b2d012b23b *man/spotReportSens.Rd
140a03b46ec0aadf3daf5ed5ab24c443 *man/spotReportSensY.Rd
ae79c2e6b969ee14038de3be4d4c8289 *man/spotRosenbrockFunction.Rd
73786ce6ce3ce400a07774c91ba0b6ce *man/spotRsm.Rd
c6a98f112b7a0a6a5f54d7056ad42ed8 *man/spotSafelyAddSource.Rd
6867a1022c71b6267fd8c6a4098a672f *man/spotSeqDesignIncreaseMultTwo.Rd
c2b3f08c7dfb75a58a1837bf9749bce2 *man/spotSeqDesignIncreasePlusOne.Rd
341aad914f30ce2247675eab601e9670 *man/spotSeverity.Rd
85ef5a6eb6aa9ad6a2c3266f420923c7 *man/spotSixHumpFunction.Rd
4ece77eab29faf8916c6bc64deb84022 *man/spotSphereFunction.Rd
41faccb2f1050e007e47190cd10210be *man/spotStepAutoOpt.Rd
7646641ddf62984de06d305c33d59c43 *man/spotStepInitial.Rd
cf4bfdad0dfdcbd4650b50f5d748c37f *man/spotStepMetaOpt.Rd
6a7726c36300596270b1d6c7e70cc351 *man/spotStepReport.Rd
6091286abb8adad8ae4f3123acf659c3 *man/spotStepRunAlg.Rd
00f3ba498d7082a28b3f3812af9f0583 *man/spotStepSequential.Rd
45ea3614f514c53d90e6684f70f498dd *man/spotVersion.Rd
93b5d4aaeae67293318c750f937ef735 *man/spotWriteAroi.Rd
de14b6043b8b3358178779414c0082be *man/spotWriteBest.Rd
bd38e5c5983b0bf493514ed5ff34e5fc *man/spotWriteDes.Rd
2a3cf00911f5a2735bf0cfb9e073a145 *man/spotWriteLines.Rd
91383133b658e937c784cd0dc839aedd *man/writeRoiFileForRepeats.Rd
