Graphics in the Context of Analyzing High-Throughput Data

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Documentation for package ‘wrGraph’ version 1.3.16

Help Pages

.addTextToPoints Add text to points on plot
.bestLegendLoc Search best corner of plot for placing for legend This function aims to find best corner for plotting a legend.
.determFigMargPix Estimate size/distance of margin to edge of image (png) in pixels
.predPointsPix Predict and return pixel location of points of current plot
.serachColName Search Column Name This function provides help when seraching column names
addBagPlot Add Bagplot To Existing Plot
checkForLegLoc Find best place on plot for placing legend
convertPlotCoordPix Convert points of plot to coordinates in pixels
cumFrqPlot Cumulative (or sorted) Frequency Plot (takes columns of 'dat' as separate series)
foldChangeArrow Add arrow for expected Fold-Change to VolcanoPlot or MA-plot
histW Histogram (version W)
imageW Display Numeric Content Of Matrix As Image
legendHist Add histogram to existing plot
MAplotW MA-plot (Differential Intensity Versus Average Intensity)
mouseOverHtmlFile Create Pouse-Over Interactive Html-Pages (With Links)
partitionPlot Make matrix for layout to partition plotting area
plotBy2Groups Separate and plot data by 2 groups
plotLinReg Plot linear regression and confidence interval of regression
plotPCAw PCA Plot With Bag-plot To Highlight Centers Of Groups
plotW2Leg x-y plot with 2 legends
profileAsClu Plot Profiles According To CLustering
staggerdCountsPlot Staggered Chart for Ploting Counts to Multiple Leveles of the Threshold used
vioplotW Violin-Plots Version W
VolcanoPlotW Volcano-Plot (Statistical Test Outcome Versus Relative Change)