Modular Bayesian Hierarchical Shrinkage Models

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Documentation for package ‘shrinkr’ version 0.4.5

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

shrinkr-package	shrinkr: Modular Bayesian Hierarchical Shrinkage Models
as.data.frame.shrinkr_fit	Convert shrinkr_fit to data.frame
as.data.frame.shrinkr_mixture	Convert mixture fit to data frame
as.data.frame.shrinkr_prior_pred	Convert prior predictive samples to data frame
as_draws_df.shrinkr_fit	Convert shrinkr_fit to draws_df
extract_mu_tau	Extract mu and tau parameters
extract_theta	Extract theta (group-level effect) parameters
fit_mixture	Fit Gaussian mixture models to posterior samples
plot.shrinkr_fit	Plot shrinkage fit
plot.shrinkr_mixture	Plot fitted marginal densities or QQ plots for mixture models
plot.shrinkr_prior_contrasts	Plot prior predictive pairwise differences
plot.shrinkr_prior_pred	Plot prior predictive samples
print.shrinkr_fit	Print method for shrinkr_fit
print.shrinkr_mixture	Print method for mixture fits
print.shrinkr_prior_contrasts	Print method for prior pairwise contrasts
print.shrinkr_prior_pred	Print method for prior predictive samples
print.summary.shrinkr_mixture	Print summary of mixture fit
print.summary.shrinkr_prior_pred	Print summary of prior predictive samples
prior_mixture	Create a mixture prior
prior_pairwise_differences	Compute prior predictive pairwise differences |theta_i - theta_j|
prior_spike_slab	Spike-and-slab prior for testing homogeneity
sample_prior_predictive	Sample from prior predictive distribution
shrink	Bayesian Hierarchical Shrinkage Model
shrinkr	shrinkr: Modular Bayesian Hierarchical Shrinkage Models
shrinkr-imports	Imports from stats
summarise_mu_tau	Summarize mu and tau hyperparameters
summarise_theta	Summarize theta parameters by group
summarize_mu_tau	Summarize mu and tau hyperparameters
summarize_theta	Summarize theta parameters by group
summary.shrinkr_fit	Summary method for shrinkr_fit
summary.shrinkr_mixture	Summary statistics for mixture fits
summary.shrinkr_prior_pred	Summary statistics for prior predictive samples
theta_contrasts	Linear combinations of theta