CRAN Package Check Results for Package QTLRel

Last updated on 2014-04-23 07:55:06.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2-14 2.10 26.90 29.00 NOTE
r-devel-linux-x86_64-debian-gcc 0.2-14 2.69 27.36 30.05 NOTE
r-devel-linux-x86_64-fedora-clang 0.2-14 57.75 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2-14 57.38 NOTE
r-devel-osx-x86_64-clang 0.2-14 50.03 NOTE
r-devel-osx-x86_64-gcc 0.2-14 NOTE
r-devel-windows-ix86+x86_64 0.2-14 12.00 44.00 56.00 NOTE
r-patched-linux-x86_64 0.2-14 2.61 27.53 30.14 NOTE
r-patched-solaris-sparc 0.2-14 317.10 NOTE
r-patched-solaris-x86 0.2-14 68.50 NOTE
r-release-linux-ix86 0.2-14 4.00 48.00 52.00 NOTE
r-release-linux-x86_64 0.2-14 2.82 27.44 30.26 NOTE
r-release-osx-x86_64-mavericks 0.2-14 WARN
r-release-osx-x86_64-snowleopard 0.2-14 OK
r-release-windows-ix86+x86_64 0.2-14 12.00 46.00 58.00 NOTE
r-oldrel-windows-ix86+x86_64 0.2-14 12.00 45.00 57.00 OK

Check Details

Version: 0.2-14
Check: foreign function calls
Result: NOTE
    Calls with DUP = FALSE:
     .C("rgdata2", gdata = as.integer(t(gdat)), nr = as.integer(nr),
     nc = as.integer(nc), ninit = as.integer(ninit), pedigree = as.integer(t(pedd)),
     recomb = as.double(rr), xchr = as.logical(xchr), seed = as.integer(seed),
     DUP = FALSE, PACKAGE = "QTLRel")
     .C("gen_Matrix", x = as.double(t(x)), nr = as.integer(nr), nc = as.integer(nc),
     nn = as.integer(nn), ksp = as.double(t(ksp)), DD = as.double(t(DD)),
     AD = as.double(t(AD)), HH = as.double(t(HH)), MH = as.double(t(MH)),
     DUP = FALSE, PACKAGE = "QTLRel")
     .C("deltaFnc", x = as.integer(t(gdata)), nr = as.integer(nr),
     nc = as.integer(nc), deltac = as.double(t(deltac)), DUP = FALSE,
     PACKAGE = "QTLRel")
     .C("conGenoPrc", mdat = as.integer(mdat[nn, ]), n = as.integer(n),
     dist = as.double(dist), pos = as.double(pos), np = as.integer(np),
     at = as.integer(at), gr = as.integer(gr), method = as.integer(method),
     pdat = as.double(pdat), error = as.logical(err), DUP = FALSE,
     PACKAGE = "QTLRel")
     .C("ibsPrc", prdat = as.double(aperm(prdat, c(3, 2, 1))), nr = as.integer(nr),
     nc = as.integer(nc), ibsc = as.double(t(ibsc)), DUP = FALSE,
     PACKAGE = "QTLRel")
     .C("ibsFnc", gdat = as.integer(t(gdata)), nr = as.integer(nr),
     nc = as.integer(nc), ibsc = as.double(t(ibsc)), DUP = FALSE,
     PACKAGE = "QTLRel")
     .C("kinship", ped = as.integer(t(ped)), nr = as.integer(nrow(ped)),
     nc = as.integer(ncol(ped)), ksp = as.double(ksp), DUP = FALSE,
     PACKAGE = "QTLRel")
    DUP = FALSE is deprecated and may be disabled in future versions of R.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-osx-x86_64-clang, r-devel-osx-x86_64-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-sparc, r-patched-solaris-x86, r-release-linux-ix86, r-release-linux-x86_64, r-release-osx-x86_64-mavericks, r-release-windows-ix86+x86_64

Version: 0.2-14
Check: PDF version of manual
Result: WARNING
    LaTeX errors when creating PDF version.
    This typically indicates Rd problems.
    LaTeX errors found:
    ! LaTeX Error: File `upquote.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    e1e562d/Rd2.tex:8: ==> Fatal error occurred, no output PDF file produced!
Flavor: r-release-osx-x86_64-mavericks